Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7802

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7801: 16169 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 1099956 to 1102203 16169 mRNA_7802: 16170 - KOG3519 Invasion-inducing protein TIAM1/CDC24 and related RhoGEF GTPases, at 1102710 to 1107641 16170

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,102,072 + 0.5
1,102,213 - 0.0
1,102,380 + 1.4
1,102,430 + 0.6
1,102,499 - -1.8
1,102,524 + 0.0
1,102,685 + 0.2
1,103,253 - 16170 mRNA_7802 0.11 -1.2
1,103,372 + 16170 mRNA_7802 0.13 -0.3
1,103,523 - 16170 mRNA_7802 0.16 -1.4
1,104,026 + 16170 mRNA_7802 0.27 -0.6
1,104,261 + 16170 mRNA_7802 0.31 -1.0
1,104,456 + 16170 mRNA_7802 0.35 -1.5
1,105,119 + 16170 mRNA_7802 0.49 -1.9
1,105,396 + 16170 mRNA_7802 0.54 -1.4
1,105,713 - 16170 mRNA_7802 0.61 0.1
1,105,734 - 16170 mRNA_7802 0.61 -3.2
1,106,022 - 16170 mRNA_7802 0.67 -1.8
1,106,133 - 16170 mRNA_7802 0.69 -1.0
1,106,341 + 16170 mRNA_7802 0.74 -0.8
1,106,354 - 16170 mRNA_7802 0.74 -0.1
1,106,609 + 16170 mRNA_7802 0.79 -3.3
1,106,760 - 16170 mRNA_7802 0.82 -1.8
1,107,198 - -0.4
1,107,516 - -1.5
1,107,528 + -0.5
1,107,533 - -1.6
1,107,678 + 0.9
1,107,683 + -1.2
1,107,691 - 2.6
1,107,791 - 0.2
1,107,808 + 0.2
1,107,829 - 1.2
1,107,830 + 1.6
1,107,833 - 0.7
1,107,844 + 1.3
1,107,851 + -0.0
1,107,853 - -1.1
1,107,873 - -0.6
1,107,983 - 2.1
1,108,033 - 0.2
1,108,044 - 3.9
1,108,059 - -0.1
1,108,153 - 0.6
1,108,168 - 1.3
1,108,169 + 0.1
1,108,169 + 0.1
1,108,176 - -0.3
1,108,177 - -0.4
1,108,179 - 0.1
1,108,187 - -0.9
1,108,190 + 1.0
1,108,190 + -0.2
1,108,207 - 1.4
1,108,211 - 0.2
1,108,212 - 1.2
1,108,236 - 0.2
1,108,236 - 0.9
1,108,237 + 0.5
1,108,247 - 0.2
1,108,259 + 1.6
1,108,261 - 0.4
1,108,262 + 0.6