Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7723

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7722: 16090 - BLAST iQ calmodulin-binding motif protein [Moesziomyces..., at 928905 to 930722 16090 mRNA_7723: 16091 - HMMPfam-Domain of unknown function (DUF427)-PF04248, at 931116 to 931814 16091 mRNA_7724: 16092 - KOG2644 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes, at 932061 to 933452 16092

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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930,117 + 16090 mRNA_7722 0.67 0.7
930,149 + 16090 mRNA_7722 0.68 0.4
930,294 + 16090 mRNA_7722 0.76 1.0
930,581 - -0.2
930,582 + -0.3
930,680 - 0.2
930,733 - 0.3
930,754 - 0.2
930,758 - 0.1
931,028 - -0.7
931,032 + 0.2
931,144 - -0.4
931,282 + 16091 mRNA_7723 0.24 -1.0
931,309 - 16091 mRNA_7723 0.28 1.1
931,314 + 16091 mRNA_7723 0.28 0.7
931,640 - 16091 mRNA_7723 0.75 -1.1
931,754 + 1.1
931,763 + 1.0
931,773 + 0.1
931,810 + 0.0
931,905 - -0.1
931,944 - 1.7
932,104 + -0.3
932,107 - -0.3
932,228 + 16092 mRNA_7724 0.12 0.0
932,263 + 16092 mRNA_7724 0.15 -0.4
932,339 + 16092 mRNA_7724 0.20 0.8
932,377 - 16092 mRNA_7724 0.23 0.4
932,500 + 16092 mRNA_7724 0.32 -0.4
932,542 - 16092 mRNA_7724 0.35 1.8
932,542 + 16092 mRNA_7724 0.35 1.0
932,776 - 16092 mRNA_7724 0.51 -1.8