Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7716

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7715: 16083 - K05906 PCYOX1, FCLY prenylcysteine oxidase / farnesylcysteine lyase, at 912208 to 914199 16083 mRNA_7716: 16084 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 914377 to 916926 16084 mRNA_7717: 16085 - K17979 MDM31 mitochondrial distribution and morphology protein 31, at 916974 to 919453 16085

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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913,428 + 16083 mRNA_7715 0.61 -0.0
913,558 - 16083 mRNA_7715 0.68 1.5
913,778 - 16083 mRNA_7715 0.79 0.9
913,848 + 16083 mRNA_7715 0.82 1.9
913,859 - 16083 mRNA_7715 0.83 -0.4
913,997 - 16083 mRNA_7715 0.90 0.6
914,316 - 0.3
914,340 - 1.4
914,461 + -1.7
914,555 + 0.5
914,617 - 0.8
914,621 + 0.1
914,806 + 16084 mRNA_7716 0.17 -0.4
915,005 + 16084 mRNA_7716 0.25 1.1
915,067 - 16084 mRNA_7716 0.27 -0.7
915,177 - 16084 mRNA_7716 0.31 -2.1
915,289 + 16084 mRNA_7716 0.36 -0.3
915,323 + 16084 mRNA_7716 0.37 0.2
915,328 - 16084 mRNA_7716 0.37 0.3
915,654 + 16084 mRNA_7716 0.50 0.3
915,730 - 16084 mRNA_7716 0.53 0.7
916,007 + 16084 mRNA_7716 0.64 -0.2
916,079 + 16084 mRNA_7716 0.67 -0.9
916,107 + 16084 mRNA_7716 0.68 -1.0
916,207 + 16084 mRNA_7716 0.72 -0.7
916,443 - 16084 mRNA_7716 0.81 0.7
916,741 + -0.4
916,751 + -1.7
916,754 - -0.4
916,763 + -0.1
916,803 + 1.3
916,806 + 0.5
916,949 + 1.2
916,976 - 1.3