Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7708

Experiments: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7707: 16075 - HMMPfam-PAZ domain-PF02170,HMMPfam-Piwi domain-PF02171,HMMPfam-Domain of unknown function (DUF1785)-PF08699,ProSiteProfiles-PAZ domain profile.-PS50821,ProSiteProfiles-Piwi domain profile.-PS50822,SMART--SM00950,SUPERFAMILY--SSF101690,SUPERFAMILY--SSF53098, at 895894 to 899712 16075 mRNA_7708: 16076 - Hypothetical Protein, at 900056 to 901517 16076 mRNA_7709: 16077 - K19877 CHS5 chitin biosynthesis protein CHS5, at 902207 to 904253 16077

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
899,295 - 16075 mRNA_7707 0.89 0.0
899,357 - -1.7
899,381 + 0.4
899,460 - -0.2
899,612 - -0.8
899,804 + 0.2
899,867 + -2.1
899,889 - -0.0
900,081 - 0.1
900,103 + 0.6
900,929 + 16076 mRNA_7708 0.60 0.2
901,046 + 16076 mRNA_7708 0.68 0.6
901,126 + 16076 mRNA_7708 0.73 0.3
901,471 + -0.6
901,486 + 0.2
901,504 + 1.7
901,505 + -0.3
901,509 + -1.1
901,509 + 0.2
901,522 - 0.4
901,524 + -0.1
901,544 - -0.0
901,547 + -0.9
901,607 + 1.4
901,617 - 0.2
901,635 - 1.0
901,668 - -0.6
901,669 - -2.1
901,677 - 0.3
901,680 - -0.7
901,683 + 0.6
901,694 + 2.2
901,695 - 0.3
901,695 + 1.0
901,696 - -0.3
901,697 - 0.4
901,699 - 0.9
901,705 - 0.7
901,735 - 0.6
901,736 + 1.0
901,737 - -0.2
901,738 + 1.0
901,738 + -0.5
901,738 + 2.4
901,739 + -0.2
901,743 - 1.5
901,749 - 0.7
901,750 - 0.2
901,757 + -0.1
901,776 - 0.3
901,778 + -0.0
901,781 - -0.3
901,782 + 0.1
901,787 - -0.4
901,787 + 0.2
901,800 + 0.8
901,802 - 0.3
901,803 + 2.1
901,813 + 1.6
901,815 + 0.1
901,820 - -1.4
901,828 - 2.5
901,854 - -0.1
901,860 - 0.4
901,862 - -1.1
901,866 - 0.1
901,888 + 1.1
901,925 - 0.4
901,946 - 0.9
901,959 - 0.7
901,962 + -1.0
901,962 - -0.4
901,964 + 0.9
901,965 - 0.5
901,971 + 0.3
901,977 + 1.2
901,991 + -0.7
901,992 - 0.2
902,011 + 0.7
902,100 - 1.0
902,102 - 2.0
902,104 + -0.8
902,156 + 0.3
902,254 - 0.5
902,398 + 0.0