Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7474

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7473: 15841 - Hypothetical Protein, at 367495 to 368778 15841 mRNA_7474: 15842 - HMMPfam-Glycosyl transferases group 1-PF00534,HMMPfam-Starch synthase catalytic domain-PF08323,SUPERFAMILY--SSF53756, at 369055 to 372143 15842

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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368,180 + 15841 mRNA_7473 0.53 0.5
368,360 + 15841 mRNA_7473 0.67 1.2
368,481 + 15841 mRNA_7473 0.77 0.5
368,497 + 15841 mRNA_7473 0.78 2.4
368,498 + 15841 mRNA_7473 0.78 1.5
368,513 - 15841 mRNA_7473 0.79 2.1
368,626 + 15841 mRNA_7473 0.88 1.8
368,626 + 15841 mRNA_7473 0.88 0.7
368,644 + 15841 mRNA_7473 0.89 0.8
368,749 - 0.2
368,758 + -0.6
368,765 + 0.7
368,769 - 1.9
368,774 + 0.3
368,776 + 1.0
368,778 - -0.8
368,780 - 1.2
368,786 - -0.4
368,800 - 1.0
368,801 + -0.3
368,805 + 0.4
368,806 + 1.3
368,825 + 0.7
368,912 - 0.3
368,938 + 2.2
368,942 - 0.1
368,944 - 0.9
368,944 - 0.1
368,947 + 1.8
368,947 - -0.0
368,947 + 0.9
368,953 + -0.1
368,956 - 0.7
368,956 - -1.3
368,958 - 0.7
368,963 + -1.6
368,965 - 0.5
368,965 - 0.7
368,967 - -1.8
368,971 - 0.5
368,975 - -3.6
368,977 + 0.7
368,980 - 0.2
368,981 - 0.2
368,982 - -0.2
368,983 + 1.1
368,985 - -1.0
368,986 - 0.9
368,986 - 0.3
368,997 + 1.4
369,002 - 1.0
369,006 - -1.5
369,011 - 1.4
369,035 + -0.3
369,068 - 0.3
369,071 - 0.9
369,074 + 0.1
369,077 - -0.1
369,078 - 1.0
369,079 - -0.8
369,081 - -1.2
369,085 + -0.4
369,094 + -0.2
369,100 + 0.3
369,102 - 0.1
369,102 - -0.8
369,104 + -0.6
369,107 + 2.4
369,108 - -0.5
369,111 + 0.5
369,111 + 0.8
369,111 + 1.8
369,116 - -0.2
369,117 - 0.5
369,127 - -0.3
369,129 - 0.5
369,132 - 0.6
369,139 + 0.2
369,139 + 0.2
369,152 - 0.1
369,217 + 0.3
369,237 + 1.5
369,241 - 0.1
369,262 - 0.0
369,263 + 0.6
369,263 + 0.0
369,269 + -0.0
369,344 + 0.7
369,402 + 15842 mRNA_7474 0.11 0.5
369,412 + 15842 mRNA_7474 0.12 0.6
369,433 - 15842 mRNA_7474 0.12 0.4
369,448 - 15842 mRNA_7474 0.13 1.3
369,472 - 15842 mRNA_7474 0.13 1.0
369,507 + 15842 mRNA_7474 0.15 0.6
369,564 - 15842 mRNA_7474 0.16 0.1
369,577 + 15842 mRNA_7474 0.17 -1.4
369,586 + 15842 mRNA_7474 0.17 0.3
369,601 - 15842 mRNA_7474 0.18 0.3
369,728 + 15842 mRNA_7474 0.22 -1.2
369,731 + 15842 mRNA_7474 0.22 2.6
369,853 + 15842 mRNA_7474 0.26 0.1
369,853 - 15842 mRNA_7474 0.26 0.7
370,557 - 15842 mRNA_7474 0.49 -0.2
371,020 - 15842 mRNA_7474 0.64 0.8
371,027 + 15842 mRNA_7474 0.64 0.6
371,186 - 15842 mRNA_7474 0.69 0.9
371,320 + 15842 mRNA_7474 0.73 0.1
371,333 + 15842 mRNA_7474 0.74 0.6
371,339 + 15842 mRNA_7474 0.74 0.6
371,473 + 15842 mRNA_7474 0.78 1.2
371,480 + 15842 mRNA_7474 0.79 1.3
371,613 - 15842 mRNA_7474 0.83 0.1
371,633 + 15842 mRNA_7474 0.83 0.8
371,639 + 15842 mRNA_7474 0.84 2.2
371,760 + 15842 mRNA_7474 0.88 3.6
372,089 + 0.8
372,210 - 1.0
372,218 + -0.1
372,227 + 0.1
372,240 + 1.3
372,246 + -0.7
372,250 + -0.0
372,256 + -0.4
372,262 - 0.1
372,266 + 0.2
372,276 + 0.8
372,397 + -0.8
372,409 + -1.5
372,415 + -0.6
372,550 - -0.8
372,586 + -1.5
372,701 - 0.0
372,702 + -0.6
372,705 - -1.0
372,708 + -0.2
372,842 - 1.1
372,849 + -1.9
373,005 - -0.1
373,110 - 2.0
373,112 - -0.5