Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7410

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7409: 15777 - HMMPfam-Nucleoporin subcomplex protein binding to Pom34-PF10487, at 208136 to 214432 15777 mRNA_7410: 15778 - BLAST capsular associated protein [Coprinopsis cinerea ..., at 214595 to 216194 15778 mRNA_7411: 15779 - K02537 MAD2 mitotic spindle assembly checkpoint protein MAD2, at 216735 to 217924 15779

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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213,953 - 0.6
213,980 + -0.7
214,103 + -0.8
214,231 - 2.0
214,384 - 0.3
214,388 + 0.6
214,411 + -0.7
214,516 - 0.4
214,528 - -0.2
214,668 - -2.9
214,699 - 1.7
214,812 - 15778 mRNA_7410 0.14 -0.4
214,814 + 15778 mRNA_7410 0.14 0.6
214,980 - 15778 mRNA_7410 0.24 0.8
215,001 - 15778 mRNA_7410 0.25 -0.6
215,007 - 15778 mRNA_7410 0.26 0.3
215,025 + 15778 mRNA_7410 0.27 0.6
215,130 + 15778 mRNA_7410 0.33 -0.7
215,195 + 15778 mRNA_7410 0.38 0.6
216,276 - 1.4
216,304 - -0.4
216,314 - 1.0
216,325 + 0.6
216,442 - -0.1
216,610 + -1.0
216,758 - 0.4
217,036 + 15779 mRNA_7411 0.25 -1.3
217,053 + 15779 mRNA_7411 0.27 -0.5