Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7022

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7021: 15389 - K21027 TRMU, SLM3 tRNA-5-taurinomethyluridine 2-sulfurtransferase, at 692794 to 694459 15389 mRNA_7022: 15390 - KOG0758 Mitochondrial carnitine-acylcarnitine carrier protein, at 694742 to 696268 15390 mRNA_7023: 15391 - Interpro RNA polymerase I-specific transcription-initiation factor, at 696469 to 700104 15391

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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694,769 + 0.5
694,890 - 0.5
695,063 - 15390 mRNA_7022 0.21 -0.3
695,163 + 15390 mRNA_7022 0.28 0.4
695,180 - 15390 mRNA_7022 0.29 0.3
695,194 + 15390 mRNA_7022 0.30 1.1
695,323 + 15390 mRNA_7022 0.38 -0.7
695,635 - 15390 mRNA_7022 0.58 0.1
695,902 - 15390 mRNA_7022 0.76 0.4
695,928 - 15390 mRNA_7022 0.78 0.1
695,929 - 15390 mRNA_7022 0.78 -0.1
695,932 + 15390 mRNA_7022 0.78 1.1
695,937 + 15390 mRNA_7022 0.78 1.4
695,942 - 15390 mRNA_7022 0.79 -0.2
696,053 - 15390 mRNA_7022 0.86 0.2
696,076 - 15390 mRNA_7022 0.87 1.0
696,077 + 15390 mRNA_7022 0.87 -0.6
696,080 - 15390 mRNA_7022 0.88 1.4
696,082 + 15390 mRNA_7022 0.88 -1.8
696,082 - 15390 mRNA_7022 0.88 -1.2
696,230 + 0.6
696,357 - 0.5
696,359 + -0.3
696,363 - 0.2
696,367 - 0.4
696,387 - -0.0
696,533 - 2.2
696,681 + -2.1