Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6964

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6963: 15331 - Hypothetical Protein, at 549842 to 550144 15331 mRNA_6964: 15332 - K18754 LIN28 protein lin-28, at 551090 to 553316 15332 mRNA_6965: 15333 - Hypothetical Protein, at 553877 to 555010 15333

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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550,286 + 1.7
550,419 - -0.2
550,443 - 0.3
550,448 - 1.3
550,479 + 0.1
550,489 + -0.7
550,492 + -2.2
550,531 + 1.6
550,536 + -0.5
550,554 - -0.1
550,644 - -0.0
550,649 - 0.3
550,654 - -0.0
550,657 + -0.9
550,721 + 0.4
550,760 - -1.1
550,934 + 0.0
551,411 + 15332 mRNA_6964 0.14 -1.0
551,432 - 15332 mRNA_6964 0.15 -1.5
551,472 - 15332 mRNA_6964 0.17 1.3
551,518 + 15332 mRNA_6964 0.19 -1.3
551,547 - 15332 mRNA_6964 0.21 0.9
551,552 - 15332 mRNA_6964 0.21 -0.5
551,562 - 15332 mRNA_6964 0.21 -0.1
551,592 - 15332 mRNA_6964 0.23 -0.4
551,597 + 15332 mRNA_6964 0.23 0.2
551,597 - 15332 mRNA_6964 0.23 0.1
551,618 - 15332 mRNA_6964 0.24 -0.9
551,624 + 15332 mRNA_6964 0.24 0.7
551,626 + 15332 mRNA_6964 0.24 -0.3
551,642 + 15332 mRNA_6964 0.25 0.3
551,656 - 15332 mRNA_6964 0.25 0.2
551,672 - 15332 mRNA_6964 0.26 2.3
551,705 + 15332 mRNA_6964 0.28 0.4
551,780 - 15332 mRNA_6964 0.31 -0.4
551,784 + 15332 mRNA_6964 0.31 0.5
551,834 - 15332 mRNA_6964 0.33 1.2
551,911 + 15332 mRNA_6964 0.37 0.3
552,036 - 15332 mRNA_6964 0.42 0.6
552,051 + 15332 mRNA_6964 0.43 0.5
552,184 + 15332 mRNA_6964 0.49 0.7
552,330 + 15332 mRNA_6964 0.56 -2.1
552,471 + 15332 mRNA_6964 0.62 0.1
552,607 + 15332 mRNA_6964 0.68 0.0
552,626 - 15332 mRNA_6964 0.69 0.8
552,660 + 15332 mRNA_6964 0.70 0.2
553,384 + 2.2
553,441 + -2.1
554,082 + 15333 mRNA_6965 0.18 -1.2
554,102 + 15333 mRNA_6965 0.20 0.1
554,110 - 15333 mRNA_6965 0.21 1.1