Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6881

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6880: 15248 - K00641 metX homoserine O-acetyltransferase, at 342593 to 344205 15248 mRNA_6881: 15249 - Hypothetical Protein, at 344637 to 347114 15249 mRNA_6882: 15250 - Hypothetical Protein, at 347533 to 348159 15250

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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343,753 + 15248 mRNA_6880 0.72 0.4
343,801 - 15248 mRNA_6880 0.75 0.1
343,821 - 15248 mRNA_6880 0.76 -0.2
343,982 - 15248 mRNA_6880 0.86 0.1
344,024 - 15248 mRNA_6880 0.89 0.5
344,110 - 0.2
344,127 - 0.6
344,129 - -1.8
344,141 + 0.2
344,314 + -0.1
344,422 + 0.7
344,423 + 0.1
344,428 + -2.0
344,430 + 0.4
344,453 - 1.0
344,462 + 0.6
344,463 - 0.7
344,470 + 1.8
344,475 + 0.7
344,546 - -0.8
344,551 + 1.2
344,585 + 0.2
344,585 + 0.4
344,587 + -0.1
344,587 + 2.7
344,615 - 0.4
344,713 + 0.4
344,726 + -2.2
345,068 + 15249 mRNA_6881 0.17 0.4
345,145 - 15249 mRNA_6881 0.21 0.2
345,178 + 15249 mRNA_6881 0.22 0.6
345,198 + 15249 mRNA_6881 0.23 -0.0
345,199 + 15249 mRNA_6881 0.23 0.5
345,349 - 15249 mRNA_6881 0.29 0.7
345,357 + 15249 mRNA_6881 0.29 1.5
345,367 + 15249 mRNA_6881 0.29 0.4
345,432 - 15249 mRNA_6881 0.32 -0.3
345,465 - 15249 mRNA_6881 0.33 0.5
345,488 + 15249 mRNA_6881 0.34 -0.4
345,489 - 15249 mRNA_6881 0.34 1.6
345,499 + 15249 mRNA_6881 0.35 0.6
345,510 - 15249 mRNA_6881 0.35 0.1
345,624 - 15249 mRNA_6881 0.40 -0.3
345,630 + 15249 mRNA_6881 0.40 0.7
345,641 - 15249 mRNA_6881 0.41 -0.3
345,642 + 15249 mRNA_6881 0.41 0.2
345,643 + 15249 mRNA_6881 0.41 -0.2
345,644 + 15249 mRNA_6881 0.41 -0.7
345,645 - 15249 mRNA_6881 0.41 0.1
345,649 - 15249 mRNA_6881 0.41 -0.2
345,658 + 15249 mRNA_6881 0.41 -1.0
345,662 - 15249 mRNA_6881 0.41 -0.7
345,665 - 15249 mRNA_6881 0.41 0.5
345,666 - 15249 mRNA_6881 0.42 0.1
345,667 + 15249 mRNA_6881 0.42 -0.8
345,668 - 15249 mRNA_6881 0.42 0.3
345,674 - 15249 mRNA_6881 0.42 0.8
345,676 + 15249 mRNA_6881 0.42 0.2
345,677 + 15249 mRNA_6881 0.42 1.2
345,679 - 15249 mRNA_6881 0.42 -0.6
345,680 + 15249 mRNA_6881 0.42 0.0
345,687 - 15249 mRNA_6881 0.42 0.9
345,687 - 15249 mRNA_6881 0.42 0.2
345,688 + 15249 mRNA_6881 0.42 0.4
345,688 + 15249 mRNA_6881 0.42 0.5
345,693 - 15249 mRNA_6881 0.43 -0.2
345,702 + 15249 mRNA_6881 0.43 0.2
345,705 + 15249 mRNA_6881 0.43 -0.4
345,707 - 15249 mRNA_6881 0.43 0.8
345,709 + 15249 mRNA_6881 0.43 0.0
345,721 + 15249 mRNA_6881 0.44 -0.1
345,724 + 15249 mRNA_6881 0.44 0.7
345,725 - 15249 mRNA_6881 0.44 1.6
345,736 - 15249 mRNA_6881 0.44 0.5
345,736 - 15249 mRNA_6881 0.44 0.4
345,738 - 15249 mRNA_6881 0.44 0.1
345,741 + 15249 mRNA_6881 0.45 2.1
345,749 + 15249 mRNA_6881 0.45 0.9
345,750 - 15249 mRNA_6881 0.45 0.3
345,753 + 15249 mRNA_6881 0.45 -0.5
345,767 + 15249 mRNA_6881 0.46 -0.4
345,769 + 15249 mRNA_6881 0.46 0.9
345,832 + 15249 mRNA_6881 0.48 0.7
345,853 - 15249 mRNA_6881 0.49 0.3
345,854 - 15249 mRNA_6881 0.49 -0.3
345,855 - 15249 mRNA_6881 0.49 -0.1
345,856 - 15249 mRNA_6881 0.49 1.0
345,862 + 15249 mRNA_6881 0.49 0.4
345,865 + 15249 mRNA_6881 0.50 -1.0
345,873 - 15249 mRNA_6881 0.50 -0.1
345,873 + 15249 mRNA_6881 0.50 -1.0
345,878 + 15249 mRNA_6881 0.50 0.2
345,880 - 15249 mRNA_6881 0.50 0.2
345,881 - 15249 mRNA_6881 0.50 0.6
345,883 + 15249 mRNA_6881 0.50 0.5
345,902 - 15249 mRNA_6881 0.51 1.1
345,915 - 15249 mRNA_6881 0.52 0.1
345,935 - 15249 mRNA_6881 0.52 0.5
345,935 - 15249 mRNA_6881 0.52 0.7
345,939 - 15249 mRNA_6881 0.53 -0.8
345,951 - 15249 mRNA_6881 0.53 0.5
345,955 - 15249 mRNA_6881 0.53 -1.3
345,958 - 15249 mRNA_6881 0.53 -1.1
345,958 - 15249 mRNA_6881 0.53 -0.9
345,959 + 15249 mRNA_6881 0.53 -1.1
345,962 + 15249 mRNA_6881 0.53 1.2
345,965 - 15249 mRNA_6881 0.54 0.3
345,967 - 15249 mRNA_6881 0.54 2.4
345,973 - 15249 mRNA_6881 0.54 -0.4
345,974 + 15249 mRNA_6881 0.54 -0.3
345,977 - 15249 mRNA_6881 0.54 1.3
345,979 - 15249 mRNA_6881 0.54 -0.1
345,979 + 15249 mRNA_6881 0.54 -0.5
345,979 + 15249 mRNA_6881 0.54 1.2
345,981 + 15249 mRNA_6881 0.54 0.5
345,986 - 15249 mRNA_6881 0.54 2.0
345,986 + 15249 mRNA_6881 0.54 0.5
345,988 + 15249 mRNA_6881 0.55 0.6
345,990 - 15249 mRNA_6881 0.55 0.5
345,990 - 15249 mRNA_6881 0.55 0.9
345,993 + 15249 mRNA_6881 0.55 -0.9
345,999 + 15249 mRNA_6881 0.55 1.5
346,001 + 15249 mRNA_6881 0.55 0.1
346,004 + 15249 mRNA_6881 0.55 1.0
346,008 + 15249 mRNA_6881 0.55 -0.4
346,008 + 15249 mRNA_6881 0.55 1.4
346,010 + 15249 mRNA_6881 0.55 0.4
346,016 - 15249 mRNA_6881 0.56 1.8
346,027 - 15249 mRNA_6881 0.56 -0.2
346,036 + 15249 mRNA_6881 0.56 0.2
346,055 + 15249 mRNA_6881 0.57 0.6
346,189 + 15249 mRNA_6881 0.63 0.5
346,260 + 15249 mRNA_6881 0.65 1.9
346,260 - 15249 mRNA_6881 0.65 -0.1
346,273 - 15249 mRNA_6881 0.66 0.0
346,298 + 15249 mRNA_6881 0.67 1.1
346,391 - 15249 mRNA_6881 0.71 -1.8
346,398 + 15249 mRNA_6881 0.71 0.1
346,429 + 15249 mRNA_6881 0.72 -1.3
346,507 - 15249 mRNA_6881 0.75 1.0
346,517 + 15249 mRNA_6881 0.76 0.1
346,763 - 15249 mRNA_6881 0.86 1.1
346,868 + 0.4
346,874 + 0.6
347,116 - 0.4
347,448 - 0.9
347,453 + 0.5
347,453 - 1.3
347,589 + -0.1
347,595 + -0.2
347,611 + 15250 mRNA_6882 0.12 2.0
347,873 + 15250 mRNA_6882 0.54 0.2
348,022 + 15250 mRNA_6882 0.78 0.6