Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6834

Experiments: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6833: 15201 - HMMPfam-Outer mitochondrial membrane transport complex protein-PF10568,HMMPfam-Tom37 C-terminal domain-PF11801, at 231692 to 232700 15201 mRNA_6834: 15202 - KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family, at 233665 to 235762 15202 mRNA_6835: 15203 - Hypothetical Protein, at 236231 to 236767 15203

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
232,680 - -0.1
232,831 - 1.5
232,964 - 0.9
233,152 - -0.2
233,304 + 0.3
233,411 + -0.8
233,442 - -0.3
233,464 + 0.1
233,485 - -0.0
233,513 + -0.5
233,534 - 0.0
233,722 - 0.1
233,742 + -1.1
233,742 + -0.5
233,906 - 15202 mRNA_6834 0.11 0.1
234,045 - 15202 mRNA_6834 0.18 -0.8
234,048 + 15202 mRNA_6834 0.18 0.1
234,354 + 15202 mRNA_6834 0.33 0.9
234,884 - 15202 mRNA_6834 0.58 1.4
234,889 + 15202 mRNA_6834 0.58 0.9
234,907 - 15202 mRNA_6834 0.59 -0.1
234,908 + 15202 mRNA_6834 0.59 0.0
235,152 - 15202 mRNA_6834 0.71 0.5
235,208 - 15202 mRNA_6834 0.74 0.1
235,213 + 15202 mRNA_6834 0.74 0.1
235,217 + 15202 mRNA_6834 0.74 0.0
235,217 + 15202 mRNA_6834 0.74 0.2
235,482 - 15202 mRNA_6834 0.87 -1.4
235,496 - 15202 mRNA_6834 0.87 -0.1
235,612 - 0.2
235,793 - 0.2
236,026 + -1.6
236,086 + -3.4
236,202 + 0.2
236,224 - 0.2
236,267 + -2.9
236,397 - 15203 mRNA_6835 0.31 -0.8
236,526 - 15203 mRNA_6835 0.55 -0.3
236,604 + 15203 mRNA_6835 0.69 -1.0
236,621 + 15203 mRNA_6835 0.73 -0.5
236,621 + 15203 mRNA_6835 0.73 0.0
236,629 + 15203 mRNA_6835 0.74 1.0
236,636 + 15203 mRNA_6835 0.75 0.1
236,687 - 15203 mRNA_6835 0.85 -0.3
236,694 + 15203 mRNA_6835 0.86 1.2
236,710 - 15203 mRNA_6835 0.89 1.8