Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6625

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6624: 14992 - Hypothetical Protein, at 1274001 to 1275291 14992 mRNA_6625: 14993 - KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins, at 1275410 to 1278515 14993 mRNA_6626: 14994 - Hypothetical Protein, at 1278893 to 1279645 14994

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,274,610 - 14992 mRNA_6624 0.47 -0.3
1,274,629 + 14992 mRNA_6624 0.49 -0.3
1,274,636 - 14992 mRNA_6624 0.49 1.5
1,274,638 + 14992 mRNA_6624 0.49 0.1
1,274,708 - 14992 mRNA_6624 0.55 -0.8
1,274,777 - 14992 mRNA_6624 0.60 -0.3
1,274,846 + 14992 mRNA_6624 0.65 2.5
1,275,033 - 14992 mRNA_6624 0.80 -0.5
1,275,092 + 14992 mRNA_6624 0.85 0.8
1,275,175 - 0.5
1,275,215 + 0.2
1,275,223 + -1.0
1,275,312 + -0.7
1,275,326 - 0.6
1,275,340 + 0.5
1,275,345 + 0.7
1,275,515 + 0.7
1,275,536 - -0.1
1,275,658 + -0.8
1,276,072 + 14993 mRNA_6625 0.21 0.7
1,276,198 + 14993 mRNA_6625 0.25 -0.0
1,276,205 + 14993 mRNA_6625 0.26 0.7
1,276,357 + 14993 mRNA_6625 0.30 -0.1
1,276,476 + 14993 mRNA_6625 0.34 0.5
1,276,482 - 14993 mRNA_6625 0.35 1.9
1,276,489 + 14993 mRNA_6625 0.35 1.3
1,276,489 + 14993 mRNA_6625 0.35 -0.3
1,276,525 + 14993 mRNA_6625 0.36 2.4
1,276,600 - 14993 mRNA_6625 0.38 0.9
1,276,611 - 14993 mRNA_6625 0.39 0.2
1,276,660 - 14993 mRNA_6625 0.40 0.8
1,276,697 + 14993 mRNA_6625 0.41 0.4
1,276,963 - 14993 mRNA_6625 0.50 -1.1
1,277,035 - 14993 mRNA_6625 0.52 0.3
1,277,364 - 14993 mRNA_6625 0.63 2.8
1,277,684 - 14993 mRNA_6625 0.73 0.3
1,277,881 + 14993 mRNA_6625 0.80 0.1
1,277,881 + 14993 mRNA_6625 0.80 -1.3
1,278,421 - -0.0
1,278,422 + 2.0
1,278,427 - 0.5
1,278,524 + -1.4
1,278,524 + 0.2
1,278,524 + 1.0
1,278,527 - -2.2
1,278,537 + 1.1
1,278,551 + 0.2
1,278,554 + 0.2
1,278,556 - 0.4
1,278,560 - 1.2
1,278,561 + 0.3
1,278,565 + 0.5
1,278,573 - 0.2
1,278,576 - 0.8
1,278,775 + 0.5
1,278,923 - 0.3
1,278,937 + 1.5
1,279,253 - 14994 mRNA_6626 0.48 -0.5
1,279,254 + 14994 mRNA_6626 0.48 1.3
1,279,324 + 14994 mRNA_6626 0.57 -0.5
1,279,374 - 14994 mRNA_6626 0.64 0.2
1,279,451 + 14994 mRNA_6626 0.74 0.1