Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6536

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6535: 14903 - KOG0715 Molecular chaperone (DnaJ superfamily), at 1022471 to 1023493 14903 mRNA_6536: 14904 - HMMPfam-Protein of unknown function (DUF837)-PF05769, at 1023887 to 1025304 14904 mRNA_6537: 14905 - Hypothetical Protein, at 1025496 to 1027566 14905

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,023,115 - 14903 mRNA_6535 0.63 0.0
1,023,260 - 14903 mRNA_6535 0.77 -1.2
1,023,547 + -0.2
1,023,568 + 0.5
1,023,670 - 1.2
1,023,691 + 0.7
1,023,697 - 0.4
1,023,699 - -0.2
1,023,725 + 0.7
1,023,800 - 2.1
1,023,849 - 0.5
1,023,865 + 1.2
1,023,868 + 0.6
1,023,884 + 1.1
1,024,198 + 14904 mRNA_6536 0.22 -2.4
1,024,705 - 14904 mRNA_6536 0.58 0.9
1,024,900 + 14904 mRNA_6536 0.71 1.9
1,024,954 + 14904 mRNA_6536 0.75 0.7
1,025,021 + 14904 mRNA_6536 0.80 0.6
1,025,024 - 14904 mRNA_6536 0.80 0.4
1,025,290 + 0.5
1,025,316 - 0.1
1,025,417 + 0.4
1,025,418 - 0.2
1,025,497 - 0.6
1,025,507 - -0.4
1,025,509 - 0.2
1,025,518 - -1.8
1,025,531 - -0.5
1,025,599 - -0.3