Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6530

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6530: 14898 - K03809 wrbA NAD(P)H dehydrogenase (quinone), at 1010809 to 1011597 14898 mRNA_6531: 14899 - K19940 SEC2 Rab guanine nucleotide exchange factor SEC2, at 1011977 to 1014833 14899

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,010,031 + 0.3
1,010,473 - -0.2
1,011,044 + 14898 mRNA_6530 0.30 -2.0
1,011,180 - 14898 mRNA_6530 0.47 -0.0
1,011,331 + 14898 mRNA_6530 0.66 -0.5
1,011,370 + 14898 mRNA_6530 0.71 0.7
1,011,624 - -1.0
1,011,625 + -0.5
1,011,635 - -1.3
1,011,636 + 0.3
1,011,638 + 1.2
1,011,648 + 0.5
1,011,656 + 0.3
1,011,771 - 2.3
1,011,825 - -0.6
1,012,076 - 2.8
1,012,078 - -1.1
1,012,081 - 0.7
1,012,092 + -0.8
1,012,094 - 0.4
1,012,095 + 1.4
1,012,101 + -0.4
1,012,111 - -0.0
1,012,111 - -0.4
1,012,117 + 0.8
1,012,123 - -0.7
1,012,126 + 1.4
1,012,131 + 0.5
1,012,131 + 1.7
1,012,146 - 0.5
1,012,147 - 2.1
1,012,157 - -0.7
1,012,227 + -0.2
1,012,265 - 14899 mRNA_6531 0.10 -0.1
1,012,268 + 14899 mRNA_6531 0.10 0.9
1,012,406 - 14899 mRNA_6531 0.15 -0.7
1,012,530 - 14899 mRNA_6531 0.19 -0.3
1,012,534 - 14899 mRNA_6531 0.19 1.2