Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6249

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6248: 14616 - Interpro GET complex subunit GET2 0, at 350255 to 351472 14616 mRNA_6249: 14617 - K01052 LIPA lysosomal acid lipase/cholesteryl ester hydrolase, at 351854 to 354817 14617 mRNA_6250: 14618 - Hypothetical Protein, at 355476 to 357206 14618

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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351,491 - 2.1
351,651 + -1.5
351,659 - 0.2
351,661 - 1.0
351,666 - 0.3
351,677 + -0.1
351,722 + 0.8
351,741 - 0.3
351,771 - 0.9
351,771 - 0.1
351,772 - 0.9
351,772 + 1.0
351,780 - 0.3
351,780 + 0.2
351,792 - 0.4
351,797 - 0.5
351,798 + -0.2
351,801 - 0.7
351,801 - 0.6
351,803 + -0.0
351,955 - -1.5
351,968 - 0.6
351,977 - -1.0
351,979 - 1.3
351,986 - -0.5
351,996 + 1.0
352,122 - 0.3
352,124 + -0.4
352,311 + 14617 mRNA_6249 0.15 0.5
352,395 + 14617 mRNA_6249 0.18 -0.8
352,552 - 14617 mRNA_6249 0.24 -1.6
352,675 - 14617 mRNA_6249 0.28 -0.7
352,701 + 14617 mRNA_6249 0.29 0.2
353,080 - 14617 mRNA_6249 0.41 0.0
353,088 - 14617 mRNA_6249 0.42 1.3
353,094 + 14617 mRNA_6249 0.42 0.9
354,122 - 14617 mRNA_6249 0.77 -0.9
354,241 - 14617 mRNA_6249 0.81 0.5
354,241 - 14617 mRNA_6249 0.81 -1.4
355,104 + 0.2
355,138 - -0.1
355,138 + -0.4
355,261 - 0.3
355,267 - 0.2
355,275 + -0.5
355,279 + 0.2
355,290 - -0.5
355,291 - 0.3
355,291 - 0.6
355,412 + -1.1
355,414 - 0.2
355,567 + -0.3