Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6113

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6112: 14480 - K01785 galM, GALM aldose 1-epimerase, at 17714 to 19844 14480 mRNA_6113: 14481 - K17263 CAND1 cullin-associated NEDD8-dissociated protein 1, at 19972 to 24805 14481 mRNA_6114: 14482 - Hypothetical Protein, at 25220 to 26095 14482

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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19,160 + 14480 mRNA_6112 0.68 0.5
19,160 + 14480 mRNA_6112 0.68 0.6
19,242 + 14480 mRNA_6112 0.72 -0.0
19,332 - 14480 mRNA_6112 0.76 1.0
19,368 + 14480 mRNA_6112 0.78 -0.2
19,396 + 14480 mRNA_6112 0.79 0.5
19,505 + 14480 mRNA_6112 0.84 -0.6
19,511 + 14480 mRNA_6112 0.84 1.2
19,589 - 14480 mRNA_6112 0.88 -0.9
19,615 - 14480 mRNA_6112 0.89 0.8
19,762 - 0.2
19,763 + 0.6
19,767 - 0.5
19,778 - 1.4
19,789 + 0.2
19,796 + 0.3
19,916 - -1.0
19,922 + 1.4
19,926 + -0.3
19,930 + 0.7
19,932 + 0.3
19,946 + 1.2
20,080 + 0.0
20,205 - 0.8
20,470 + 14481 mRNA_6113 0.10 0.1
20,606 - 14481 mRNA_6113 0.13 -0.8
20,828 - 14481 mRNA_6113 0.18 -1.7
21,984 + 14481 mRNA_6113 0.42 1.9
22,046 + 14481 mRNA_6113 0.43 -0.9
22,179 + 14481 mRNA_6113 0.46 -1.0
22,314 + 14481 mRNA_6113 0.48 -0.4
22,478 + 14481 mRNA_6113 0.52 0.7
22,533 + 14481 mRNA_6113 0.53 0.8
22,680 - 14481 mRNA_6113 0.56 -0.1
22,881 - 14481 mRNA_6113 0.60 0.2
22,887 + 14481 mRNA_6113 0.60 -0.5
22,887 + 14481 mRNA_6113 0.60 -0.1
22,985 - 14481 mRNA_6113 0.62 1.0
23,003 - 14481 mRNA_6113 0.63 1.0
23,010 - 14481 mRNA_6113 0.63 -0.7
23,010 - 14481 mRNA_6113 0.63 0.9
23,010 - 14481 mRNA_6113 0.63 -0.7
23,015 - 14481 mRNA_6113 0.63 0.0
23,016 + 14481 mRNA_6113 0.63 -0.8
23,017 - 14481 mRNA_6113 0.63 1.3
23,301 + 14481 mRNA_6113 0.69 1.1
23,310 - 14481 mRNA_6113 0.69 -1.9
23,594 - 14481 mRNA_6113 0.75 -0.5
23,673 + 14481 mRNA_6113 0.77 -0.3
23,769 + 14481 mRNA_6113 0.79 -0.3
23,770 + 14481 mRNA_6113 0.79 1.1
23,937 - 14481 mRNA_6113 0.82 1.9
24,044 - 14481 mRNA_6113 0.84 2.6
24,083 + 14481 mRNA_6113 0.85 2.6
24,160 + 14481 mRNA_6113 0.87 0.4
24,221 - 14481 mRNA_6113 0.88 0.2
24,280 + 14481 mRNA_6113 0.89 1.3
24,283 - 14481 mRNA_6113 0.89 1.2
24,327 + -0.1
24,337 - -0.8
24,337 - 0.4
24,344 + 0.9
24,392 - -0.5
24,441 + -0.3
24,495 - 0.1
24,552 - 1.3
24,555 + 1.3
24,639 + -1.1
24,665 - 0.8
24,666 - 1.5
24,805 + -0.1
25,098 + 0.8
25,124 - -0.1
25,227 + 3.3
25,495 + 14482 mRNA_6114 0.31 0.8
25,675 + 14482 mRNA_6114 0.52 -1.1
25,801 - 14482 mRNA_6114 0.66 -0.1