Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6106

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6106: 14474 - K08332 VAC8 vacuolar protein 8, at 223 to 3658 14474 mRNA_6107: 14475 - K14401 CPSF1, CFT1 cleavage and polyadenylation specificity factor subunit 1, at 3990 to 10005 14475

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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39 + -0.8
39 + 1.1
40 + -0.0
40 + 1.1
40 + -0.8
41 + -0.8
56 + 1.2
56 + -0.1
56 + 0.5
58 + 0.4
59 + 0.3
59 + -1.9
62 - -0.0
65 - -1.2
77 + -0.9
84 + -1.5
102 + -0.7
137 + -0.2
151 + -0.2
200 + 1.4
208 + -0.9
216 + 0.2
229 + -1.1
348 - 1.3
430 + 0.9
498 - 0.0
502 - 0.7
685 + 14474 mRNA_6106 0.13 -0.9
747 + 14474 mRNA_6106 0.15 0.3
755 + 14474 mRNA_6106 0.15 0.0
946 + 14474 mRNA_6106 0.21 -0.7
975 + 14474 mRNA_6106 0.22 0.5
1,245 + 14474 mRNA_6106 0.30 -0.5
2,125 + 14474 mRNA_6106 0.55 0.4
2,839 - 14474 mRNA_6106 0.76 -0.9
3,125 - 14474 mRNA_6106 0.84 -0.3
3,248 - 14474 mRNA_6106 0.88 -2.6
3,570 + 0.1
3,665 + 0.2
3,692 + 0.2
3,706 + -0.5
3,726 + 1.4
3,820 + -0.6
3,853 + 0.5
3,859 + 0.7
3,909 - 0.6
3,929 - 0.1