Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5976

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5975: 14343 - K14636 SLC18A3, VACHT MFS transporter, DHA1 family, solute carrier family 18 (vesicular acetylcholine transporter), member 3, at 1361032 to 1363169 14343 mRNA_5976: 14344 - SUPERFAMILY--SSF52047, at 1363510 to 1364859 14344 mRNA_5977: 14345 - HMMPfam-F-box-like-PF12937, at 1365252 to 1367121 14345

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,362,638 + 14343 mRNA_5975 0.75 0.1
1,362,984 + -0.4
1,363,116 - 0.2
1,363,134 + 0.1
1,363,269 - 1.3
1,363,286 + 0.3
1,363,299 + 0.2
1,363,300 + 1.2
1,363,419 - -1.0
1,363,442 - -1.1
1,363,537 + 0.2
1,363,742 + 14344 mRNA_5976 0.17 0.4
1,363,979 - 14344 mRNA_5976 0.35 0.3
1,364,147 - 14344 mRNA_5976 0.47 1.0
1,364,579 + 14344 mRNA_5976 0.79 0.5
1,364,697 - 14344 mRNA_5976 0.88 -1.2
1,364,897 - 0.3
1,365,020 + -1.0
1,365,700 + 14345 mRNA_5977 0.24 1.8