Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5934

Experiments: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5933: 14301 - SUPERFAMILY--SSF51126, at 1266869 to 1268786 14301 mRNA_5934: 14302 - HMMPfam-Mitochondrial carrier protein-PF00153,ProSiteProfiles-Solute carrier (Solcar) repeat profile.-PS50920,SUPERFAMILY--SSF103506, at 1269000 to 1270285 14302 mRNA_5935: 14303 - HMMPfam-Homeobox KN domain-PF05920,ProSiteProfiles-'Homeobox' domain profile.-PS50071,SUPERFAMILY--SSF46689, at 1270620 to 1271852 14303

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
1,269,148 + 14302 mRNA_5934 0.12 1.2
1,269,541 - 14302 mRNA_5934 0.42 1.2
1,269,723 - 14302 mRNA_5934 0.56 0.9
1,269,783 + 14302 mRNA_5934 0.61 0.3
1,270,024 - 14302 mRNA_5934 0.80 1.4
1,270,157 - -0.3
1,270,171 - 0.4
1,270,173 + -0.5
1,270,312 - 1.1
1,270,327 - 1.2
1,270,344 + -0.9
1,270,386 + 2.1
1,270,448 + -0.0
1,270,461 + -1.4
1,270,467 - 0.2
1,270,486 + -1.1
1,270,497 + -0.9
1,270,669 + 0.5
1,270,787 - 14303 mRNA_5935 0.14 -0.5
1,270,916 - 14303 mRNA_5935 0.24 0.2