Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5891

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5891: 14259 - K11788 ADE5 phosphoribosylamine--glycine ligase / phosphoribosylformylglycinamidine cyclo-ligase, at 1182342 to 1185171 14259 mRNA_5892: 14260 - Hypothetical Protein, at 1185349 to 1185740 14260 mRNA_5893: 14261 - KOG1748 Acyl carrier protein/NADH-ubiquinone oxidoreductase, NDUFAB1/SDAP subunit, at 1185881 to 1186514 14261

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,181,353 - -0.1
1,181,354 - 0.3
1,181,360 - 0.0
1,181,361 + 0.6
1,181,364 + 0.1
1,181,364 + -0.9
1,181,368 + -0.2
1,181,369 - -1.0
1,181,373 - 1.6
1,181,373 + -0.5
1,181,376 + 0.2
1,181,376 + 1.6
1,181,377 + 0.8
1,181,379 + -0.9
1,181,384 + 1.9
1,181,386 + 0.6
1,181,556 - 0.6
1,181,571 - -1.4
1,181,574 + -1.5
1,181,694 + 0.9
1,181,960 - 0.6
1,181,978 + 0.4
1,182,006 + -1.1
1,182,123 + -0.0
1,182,131 + -0.3
1,182,136 - 2.1
1,182,286 - -1.9
1,182,449 + -0.4
1,182,762 + 14259 mRNA_5891 0.15 -2.5
1,182,769 - 14259 mRNA_5891 0.15 -2.4
1,183,774 + 14259 mRNA_5891 0.51 -1.4
1,185,527 + 14260 mRNA_5892 0.45 0.0
1,185,545 - 14260 mRNA_5892 0.50 0.5
1,185,649 - 14260 mRNA_5892 0.77 -0.7
1,185,664 - 14260 mRNA_5892 0.80 -0.1
1,185,811 - 0.5