Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5649

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5648: 14016 - K11268 ESCO, ECO1 N-acetyltransferase, at 592841 to 594405 14016 mRNA_5649: 14017 - SUPERFAMILY--SSF52047, at 595094 to 596616 14017 mRNA_5650: 14018 - Hypothetical Protein, at 597091 to 598437 14018

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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594,511 + -1.4
594,646 + 0.8
594,662 + 0.1
594,670 + 0.3
594,920 - 0.2
594,964 - -0.3
594,983 - 0.8
595,152 + 0.1
595,385 - 14017 mRNA_5649 0.19 1.9
595,404 - 14017 mRNA_5649 0.20 0.6
595,535 + 14017 mRNA_5649 0.29 0.6
595,540 + 14017 mRNA_5649 0.29 -0.1
595,558 + 14017 mRNA_5649 0.30 1.4
596,261 - 14017 mRNA_5649 0.77 -0.7
596,394 + 14017 mRNA_5649 0.85 0.1
596,399 + 14017 mRNA_5649 0.86 0.2
596,570 + 0.8
596,684 + 0.2
596,698 + 0.8
596,701 - -1.6
596,723 - 1.4
597,007 - -0.1
597,030 + 0.1
597,031 - -0.2
597,169 - 0.3
597,176 - 2.6
597,476 - 14018 mRNA_5650 0.29 1.0
597,500 - 14018 mRNA_5650 0.30 -0.1
597,568 + 14018 mRNA_5650 0.35 1.7