Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5607

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5606: 13974 - HMMPfam-Glycosyl hydrolase family 61-PF03443, at 490691 to 492139 13974 mRNA_5607: 13975 - HMMPfam-rRNA processing-PF08524, at 492643 to 493643 13975

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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491,714 + 13974 mRNA_5606 0.71 0.9
491,893 + 13974 mRNA_5606 0.83 0.5
492,008 + 2.1
492,129 - 0.4
492,129 - -0.5
492,261 - -1.4
492,279 + 1.8
492,298 - 0.3
492,303 - 3.9
492,412 - 0.1
492,434 - 0.1
492,459 + 0.2
492,586 - 0.4
492,608 + -1.4
492,727 - 0.5
492,727 - -0.9
492,736 + -1.4
492,736 + 1.8
492,876 + 13975 mRNA_5607 0.23 0.5
493,331 + 13975 mRNA_5607 0.69 -1.5
493,908 - 0.7
493,924 + -0.6
494,365 + 0.7
494,552 + -0.4