Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5591

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5591: 13959 - K11182 AOC1, ABP1 diamine oxidase, at 458129 to 461343 13959 mRNA_5592: 13960 - HMMPfam-Alcohol acetyltransferase-PF07247,SUPERFAMILY--SSF52777, at 461599 to 463064 13960

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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457,260 + 1.6
457,327 + 1.0
457,332 + -0.1
457,442 - 3.1
457,454 - -0.2
457,465 + 1.5
457,468 + -0.9
457,596 + -1.0
457,642 + 1.2
457,706 + -0.0
457,757 - -0.7
457,909 - 0.0
457,998 - 0.9
458,023 + 0.7
458,024 - 1.0
458,051 - -0.7
458,055 - 1.6
458,058 + 2.0
459,071 - 13959 mRNA_5591 0.29 0.7
459,203 + 13959 mRNA_5591 0.33 -0.5
459,203 + 13959 mRNA_5591 0.33 -0.2
459,226 + 13959 mRNA_5591 0.34 -0.1
459,335 - 13959 mRNA_5591 0.38 0.1
459,384 + 13959 mRNA_5591 0.39 -0.4
459,390 - 13959 mRNA_5591 0.39 -0.1
459,777 - 13959 mRNA_5591 0.51 1.2
459,795 + 13959 mRNA_5591 0.52 -0.3
460,080 - 13959 mRNA_5591 0.61 1.1
460,085 + 13959 mRNA_5591 0.61 0.6
460,492 - 13959 mRNA_5591 0.73 0.4
460,521 - 13959 mRNA_5591 0.74 0.5
460,954 - 13959 mRNA_5591 0.88 -0.7
461,214 - 0.4
461,232 - 0.9
461,497 + -1.3
461,497 + 1.4
461,562 - 1.6
461,686 - 0.4
461,697 - 1.1
461,953 - 13960 mRNA_5592 0.24 0.8
462,286 - 13960 mRNA_5592 0.47 -0.2
462,330 + 13960 mRNA_5592 0.50 -1.1