Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5517

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5517: 13885 - PRINTS-Proline rich extensin signature-PR01217, at 280339 to 282741 13885

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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279,435 - 2.1
279,550 + 2.2
279,552 - 0.4
279,562 + -0.7
279,565 + -0.0
279,589 + 0.7
279,710 - -0.0
279,711 + 1.1
279,716 - -0.2
279,726 + 0.6
279,747 + -0.4
279,846 + 0.8
279,864 + -0.0
279,866 - -1.0
279,874 + 0.3
279,883 + 1.2
279,902 + 0.9
280,009 - 0.9
280,050 + 0.5
280,053 - 1.5
280,092 + 0.6
280,135 + 0.7
280,173 + 0.7
280,186 + 0.4
280,451 - -4.1
280,457 + -1.8
280,625 - 13885 mRNA_5517 0.12 0.4
280,918 + 13885 mRNA_5517 0.24 1.0
281,056 + 13885 mRNA_5517 0.30 -0.2
281,223 + 13885 mRNA_5517 0.37 0.4
281,403 + 13885 mRNA_5517 0.44 0.5
281,474 - 13885 mRNA_5517 0.47 0.3
281,813 + 13885 mRNA_5517 0.61 -0.5
281,817 - 13885 mRNA_5517 0.62 2.0
281,915 + 13885 mRNA_5517 0.66 0.2
281,918 - 13885 mRNA_5517 0.66 1.3
282,084 - 13885 mRNA_5517 0.73 -2.2
282,441 + 13885 mRNA_5517 0.87 0.5
282,669 - 0.2
282,949 + 1.1
283,108 - 0.1
283,138 + 0.3
283,404 - 0.2
283,426 - 0.3
283,532 - -0.7
283,544 - 0.8
283,571 + -0.3