Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5498

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5498: 13866 - Hypothetical Protein, at 238766 to 240187 13866 mRNA_5499: 13867 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 240567 to 242106 13867

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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237,900 - 1.2
237,925 + 0.4
237,928 + 0.5
238,042 - -0.2
238,073 + 0.9
238,082 - -1.4
238,086 + 1.5
238,097 + 1.0
238,097 + -0.3
238,098 + 0.1
238,191 + 2.1
238,196 - 0.2
238,210 - 0.4
238,212 + -0.2
238,234 + -0.4
238,287 - 1.7
238,319 + -0.3
238,336 + 0.7
238,353 + 1.9
238,359 - -0.8
238,359 + 1.2
238,360 - -0.3
238,396 - 0.7
238,408 - 0.5
238,415 - 0.5
238,416 + 0.8
238,420 + 0.8
238,422 - 1.5
238,446 + -1.9
238,473 + 0.3
238,479 - 0.0
238,484 + -0.4
238,485 - -0.3
238,487 + 1.5
238,507 - -0.8
238,508 + -1.1
238,613 + 0.5
238,619 + 0.1
238,626 + -2.3
238,629 - -0.2
238,633 + 0.5
238,636 + 0.0
238,637 + -0.5
238,639 + 1.1
238,650 - -0.7
238,653 + 0.2
238,656 - 2.4
238,681 + -2.4
238,717 + -0.5
238,732 - 0.4
238,732 + -2.3
238,751 - 0.2
238,758 - 1.6
238,762 - -1.3
238,767 + -0.7
238,770 - 0.5
238,775 - 0.7
238,883 - 0.4
238,893 - 1.6
238,897 - 1.0
238,901 - 0.4
238,904 + 0.9
238,906 + 1.8
238,925 - 13866 mRNA_5498 0.11 -0.4
238,934 + 13866 mRNA_5498 0.12 0.4
238,938 - 13866 mRNA_5498 0.12 -0.4
238,968 - 13866 mRNA_5498 0.14 0.4
238,970 - 13866 mRNA_5498 0.14 0.9
238,983 + 13866 mRNA_5498 0.15 -1.3
238,986 + 13866 mRNA_5498 0.15 -0.7
238,999 - 13866 mRNA_5498 0.16 1.8
239,004 + 13866 mRNA_5498 0.17 -0.2
239,041 - 13866 mRNA_5498 0.19 -1.5
239,043 + 13866 mRNA_5498 0.19 1.5
239,064 + 13866 mRNA_5498 0.21 0.0
239,091 + 13866 mRNA_5498 0.23 0.5
239,100 + 13866 mRNA_5498 0.23 1.1
239,111 - 13866 mRNA_5498 0.24 -0.1
239,117 - 13866 mRNA_5498 0.25 1.7
239,146 - 13866 mRNA_5498 0.27 1.9
239,167 + 13866 mRNA_5498 0.28 0.2
239,180 - 13866 mRNA_5498 0.29 0.4
239,187 + 13866 mRNA_5498 0.30 -0.8
239,193 - 13866 mRNA_5498 0.30 -0.4
239,193 - 13866 mRNA_5498 0.30 1.1
239,196 + 13866 mRNA_5498 0.30 0.5
239,221 - 13866 mRNA_5498 0.32 -0.4
239,232 - 13866 mRNA_5498 0.33 0.6
239,237 - 13866 mRNA_5498 0.33 -2.7
239,243 - 13866 mRNA_5498 0.34 -0.4
239,255 - 13866 mRNA_5498 0.34 0.9
239,272 + 13866 mRNA_5498 0.36 -0.7
239,275 + 13866 mRNA_5498 0.36 0.1
239,382 + 13866 mRNA_5498 0.43 -0.0
239,481 + 13866 mRNA_5498 0.50 -1.4
239,524 - 13866 mRNA_5498 0.53 1.2
239,671 - 13866 mRNA_5498 0.64 3.3
239,783 - 13866 mRNA_5498 0.72 -1.2
239,816 + 13866 mRNA_5498 0.74 -0.7
240,374 - 0.3
240,553 + 0.6
240,773 + 13867 mRNA_5499 0.13 0.7
241,007 - 13867 mRNA_5499 0.29 0.2
241,108 + 13867 mRNA_5499 0.35 -1.6