Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5428

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5427: 13795 - Hypothetical Protein, at 75255 to 76663 13795 mRNA_5428: 13796 - KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies, at 77473 to 79440 13796 mRNA_5429: 13797 - K01067 E3.1.2.1, ACH1 acetyl-CoA hydrolase, at 79557 to 82396 13797

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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76,578 - 0.0
76,596 + 1.8
76,811 + 0.5
76,868 + 0.3
77,130 + 0.3
77,150 + 0.8
77,154 + -0.3
77,162 + -0.5
77,299 - 2.9
77,313 + -0.9
77,316 - -1.3
77,321 - 1.5
77,343 + 1.9
77,454 - 0.4
77,483 + 1.3
77,512 + 0.2
77,776 - 13796 mRNA_5428 0.15 2.2
77,784 + 13796 mRNA_5428 0.16 1.4
78,065 - 13796 mRNA_5428 0.30 -0.7
78,066 + 13796 mRNA_5428 0.30 0.5
78,291 - 13796 mRNA_5428 0.42 0.8
78,300 - 13796 mRNA_5428 0.42 -0.1
78,491 - 13796 mRNA_5428 0.52 -0.1
78,502 - 13796 mRNA_5428 0.52 0.7
78,563 - 13796 mRNA_5428 0.55 -0.4
78,602 + 13796 mRNA_5428 0.57 0.3
78,907 - 13796 mRNA_5428 0.73 0.7
79,226 + 13796 mRNA_5428 0.89 0.4
79,295 - -0.7
79,319 - 0.4
79,492 + -1.1
79,780 - 1.5
79,781 + 0.9
79,869 + 13797 mRNA_5429 0.11 0.0
79,869 + 13797 mRNA_5429 0.11 0.5
79,877 - 13797 mRNA_5429 0.11 -0.3
79,889 + 13797 mRNA_5429 0.12 -0.2
79,920 + 13797 mRNA_5429 0.13 1.2
79,975 + 13797 mRNA_5429 0.15 0.6
80,070 + 13797 mRNA_5429 0.18 -2.1
80,275 - 13797 mRNA_5429 0.25 2.1