Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5324

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5323: 13691 - K10842 MNAT1 CDK-activating kinase assembly factor MAT1, at 456066 to 457717 13691 mRNA_5324: 13692 - KOG2852 Possible oxidoreductase, at 457858 to 459287 13692 mRNA_5325: 13693 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF52266, at 459771 to 461459 13693

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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457,759 + -0.4
457,780 - -0.8
457,784 - 0.7
457,785 - -0.7
457,798 + -0.5
457,887 + 1.1
457,929 - 0.1
458,084 + 13692 mRNA_5324 0.16 -0.8
458,116 + 13692 mRNA_5324 0.18 -0.1
458,324 + 13692 mRNA_5324 0.33 -0.1
458,535 - 13692 mRNA_5324 0.47 -0.5
458,668 + 13692 mRNA_5324 0.57 0.1
458,698 - 13692 mRNA_5324 0.59 -0.5
459,022 - 13692 mRNA_5324 0.81 1.1
459,238 - -0.6
459,242 - -0.0
459,246 + 0.3
459,519 + 0.7
459,546 + 0.7
459,640 + 1.2
459,661 + 0.9
459,669 - 0.2
459,793 - -0.5
459,842 + -0.1
459,988 - 13693 mRNA_5325 0.13 1.0
460,136 + 13693 mRNA_5325 0.22 1.9
460,139 - 13693 mRNA_5325 0.22 -2.2
460,139 - 13693 mRNA_5325 0.22 -1.4
460,234 - 13693 mRNA_5325 0.27 0.5