Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5317

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5316: 13684 - Hypothetical Protein, at 440018 to 441628 13684 mRNA_5317: 13685 - K17498 SPN1, IWS1 transcription factor SPN1, at 441871 to 444778 13685 mRNA_5318: 13686 - KOG4315 G-patch nucleic acid binding protein, at 444861 to 446150 13686

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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441,095 - 13684 mRNA_5316 0.67 0.3
441,107 + 13684 mRNA_5316 0.68 0.1
441,203 - 13684 mRNA_5316 0.74 0.3
441,234 - 13684 mRNA_5316 0.75 0.3
441,321 - 13684 mRNA_5316 0.81 -1.1
441,429 + 13684 mRNA_5316 0.88 0.5
441,548 - 0.2
441,551 + 0.8
441,554 - -0.5
441,750 + -0.3
441,967 + 1.9
442,128 + -0.4
442,146 + 0.4
442,289 - 13685 mRNA_5317 0.14 0.9
442,296 - 13685 mRNA_5317 0.15 -1.3
442,578 - 13685 mRNA_5317 0.24 1.0
442,618 + 13685 mRNA_5317 0.26 -0.1
442,734 + 13685 mRNA_5317 0.30 -0.4
442,748 - 13685 mRNA_5317 0.30 -0.7
442,750 + 13685 mRNA_5317 0.30 -0.5
442,751 - 13685 mRNA_5317 0.30 -0.0
442,757 + 13685 mRNA_5317 0.30 -0.4
442,871 - 13685 mRNA_5317 0.34 0.1
443,150 - 13685 mRNA_5317 0.44 1.1
443,152 - 13685 mRNA_5317 0.44 -1.8
443,211 + 13685 mRNA_5317 0.46 0.9
444,765 - -0.8
445,052 - 13686 mRNA_5318 0.15 0.1