Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5280

Experiments: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5279: 13647 - KOG2231 Predicted E3 ubiquitin ligase, at 344945 to 347664 13647 mRNA_5280: 13648 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 348551 to 349893 13648 mRNA_5281: 13649 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 350665 to 352490 13649

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
347,729 - -1.9
347,796 + 3.2
347,882 + 0.1
347,904 + 0.0
348,210 - -0.1
348,212 - 0.0
348,312 - 1.1
348,347 + -0.3
348,360 + 2.9
348,384 - 0.0
348,762 + 13648 mRNA_5280 0.16 -0.6
348,798 - 13648 mRNA_5280 0.18 2.3
349,032 - 13648 mRNA_5280 0.36 0.4
349,050 + 13648 mRNA_5280 0.37 -0.7
349,356 + 13648 mRNA_5280 0.60 -0.4
349,657 + 13648 mRNA_5280 0.82 -1.0
349,764 + 0.1
349,799 - -1.4
349,802 - -1.0
349,802 + -0.6
349,864 + -0.3
350,002 + -0.9
350,007 + 0.7
350,079 - -0.5
350,110 + -1.6
350,118 + 1.0
350,173 - -1.2
350,177 + -1.2
350,264 - 0.4
350,269 + 0.0
350,269 - -0.4
350,275 - -0.2
350,278 + 1.0
350,283 + 1.1
350,290 - 1.0
350,302 + 1.5
350,430 - 1.5
350,474 + 0.7
350,565 - -1.3
350,647 + -1.6
350,650 - 0.7
350,651 + 1.1