Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5113

Experiments: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5112: 13480 - KOG0872 Sterol C5 desaturase, at 1789147 to 1790624 13480 mRNA_5113: 13481 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 1790851 to 1792363 13481 mRNA_5114: 13482 - K14820 BRX1, BRIX1 ribosome biogenesis protein BRX1, at 1792660 to 1793898 13482

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
1,790,098 - 13480 mRNA_5112 0.64 0.9
1,790,491 - -0.8
1,790,625 + 2.1
1,790,633 - 1.2
1,790,798 - 1.4
1,790,924 + 0.3
1,790,971 + 0.2
1,790,978 + -3.1
1,791,063 - 13481 mRNA_5113 0.14 -0.5
1,791,088 - 13481 mRNA_5113 0.16 0.2
1,791,349 - 13481 mRNA_5113 0.33 1.0
1,791,367 - 13481 mRNA_5113 0.34 1.2
1,791,389 + 13481 mRNA_5113 0.36 -0.3
1,791,799 + 13481 mRNA_5113 0.63 -1.9
1,791,839 + 13481 mRNA_5113 0.65 -0.7
1,791,976 - 13481 mRNA_5113 0.74 2.2
1,792,077 - 13481 mRNA_5113 0.81 -0.3
1,792,107 + 13481 mRNA_5113 0.83 0.4
1,792,251 - 1.1
1,792,554 - 2.6
1,792,554 - 1.2
1,792,574 - 0.8