Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4973

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4972: 13340 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 1449962 to 1451515 13340 mRNA_4973: 13341 - K18466 VPS26 vacuolar protein sorting-associated protein 26, at 1451904 to 1453549 13341 mRNA_4974: 13342 - Hypothetical Protein, at 1453896 to 1454599 13342

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,450,990 - 13340 mRNA_4972 0.66 0.8
1,451,156 - 13340 mRNA_4972 0.77 0.5
1,451,193 - 13340 mRNA_4972 0.79 2.2
1,451,207 - 13340 mRNA_4972 0.80 0.2
1,451,282 - 13340 mRNA_4972 0.85 -0.1
1,451,318 + 13340 mRNA_4972 0.87 1.3
1,451,525 + 0.1
1,451,530 - 2.0
1,451,558 - -0.8
1,451,715 + 0.7
1,451,729 + 1.2
1,451,870 + 0.2
1,453,031 - 13341 mRNA_4973 0.68 -1.8
1,453,866 - 2.5
1,454,164 + 13342 mRNA_4974 0.38 1.9
1,454,169 + 13342 mRNA_4974 0.39 1.1
1,454,186 + 13342 mRNA_4974 0.41 0.5
1,454,195 - 13342 mRNA_4974 0.42 0.6
1,454,219 - 13342 mRNA_4974 0.46 0.2
1,454,285 + 13342 mRNA_4974 0.55 0.6
1,454,341 - 13342 mRNA_4974 0.63 1.6
1,454,354 - 13342 mRNA_4974 0.65 -0.6
1,454,381 - 13342 mRNA_4974 0.69 -0.5
1,454,407 + 13342 mRNA_4974 0.73 -0.3
1,454,479 - 13342 mRNA_4974 0.83 -0.0
1,454,498 - 13342 mRNA_4974 0.86 -1.1
1,454,504 - 13342 mRNA_4974 0.86 0.0
1,454,505 + 13342 mRNA_4974 0.87 -0.0
1,454,507 - 13342 mRNA_4974 0.87 -0.1
1,454,512 + 13342 mRNA_4974 0.88 -0.1
1,454,522 - 13342 mRNA_4974 0.89 0.3
1,454,531 + 1.0