Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4925

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4924: 13292 - KOG3012 Uncharacterized conserved protein, at 1323215 to 1324561 13292 mRNA_4925: 13293 - ProSiteProfiles-WW/rsp5/WWP domain profile.-PS50020,SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045, at 1324848 to 1328229 13293 mRNA_4926: 13294 - ProSiteProfiles-Chromo and chromo shadow domain profile.-PS50013, at 1328317 to 1334558 13294

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,323,923 - 13292 mRNA_4924 0.53 -1.8
1,324,200 - 13292 mRNA_4924 0.73 0.7
1,324,764 + 0.8
1,324,786 - 0.7
1,324,812 + 0.0
1,325,224 - 13293 mRNA_4925 0.11 0.3
1,325,385 - 13293 mRNA_4925 0.16 0.8
1,325,644 + 13293 mRNA_4925 0.24 1.1
1,326,104 + 13293 mRNA_4925 0.37 1.5
1,326,108 + 13293 mRNA_4925 0.37 0.6
1,326,399 + 13293 mRNA_4925 0.46 2.2
1,326,916 - 13293 mRNA_4925 0.61 -1.2
1,328,381 + -0.6
1,328,395 + -0.5
1,328,446 + 0.2
1,328,474 - 0.0
1,328,474 - 1.3
1,328,606 - -0.4
1,328,700 - 0.5
1,328,750 - -0.4
1,328,752 - -0.7
1,328,772 + -1.4
1,328,773 + 1.6
1,328,806 + 0.4
1,328,810 + 0.1
1,328,811 - 0.2
1,328,847 + 0.5
1,328,851 - -0.0
1,328,900 + 0.5
1,328,922 + 0.5
1,328,927 + 0.3
1,328,960 - 13294 mRNA_4926 0.10 -0.3
1,328,973 - 13294 mRNA_4926 0.11 0.5
1,328,988 + 13294 mRNA_4926 0.11 -0.7
1,329,029 - 13294 mRNA_4926 0.11 2.9
1,329,049 - 13294 mRNA_4926 0.12 -0.2
1,329,056 + 13294 mRNA_4926 0.12 0.4
1,329,062 + 13294 mRNA_4926 0.12 -1.6
1,329,070 - 13294 mRNA_4926 0.12 2.1
1,329,074 - 13294 mRNA_4926 0.12 1.3
1,329,093 + 13294 mRNA_4926 0.12 0.1
1,329,095 + 13294 mRNA_4926 0.12 -0.1
1,329,143 - 13294 mRNA_4926 0.13 0.1