Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4894

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4893: 13261 - Hypothetical Protein, at 1239240 to 1240302 13261 mRNA_4894: 13262 - K11187 PRDX5 peroxiredoxin 5, atypical 2-Cys peroxiredoxin, at 1240475 to 1241393 13262 mRNA_4895: 13263 - HMMPfam-Etoposide-induced protein 2.4 (EI24)-PF07264, at 1241755 to 1243025 13263

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,239,916 - 13261 mRNA_4893 0.64 1.9
1,240,333 - 0.3
1,240,629 + 13262 mRNA_4894 0.17 2.3
1,240,794 + 13262 mRNA_4894 0.35 2.3
1,241,074 + 13262 mRNA_4894 0.65 0.3
1,241,177 - 13262 mRNA_4894 0.76 -0.3
1,241,198 + 13262 mRNA_4894 0.79 2.3
1,241,222 + 13262 mRNA_4894 0.81 -0.9
1,241,226 + 13262 mRNA_4894 0.82 -1.4
1,241,226 + 13262 mRNA_4894 0.82 -1.2
1,241,238 - 13262 mRNA_4894 0.83 1.4
1,241,244 - 13262 mRNA_4894 0.84 -0.2
1,241,372 - 0.8
1,241,378 - -1.7
1,241,379 + -1.1
1,241,491 - 2.2
1,241,498 + 0.3
1,241,505 - 1.1
1,241,507 + 0.5
1,241,512 - -0.7
1,241,516 + 0.3
1,241,520 + 2.0
1,241,522 - 1.9
1,241,525 + 0.7
1,241,526 - 0.7
1,241,527 - -1.8
1,241,527 - -0.9
1,241,529 + 1.9
1,241,529 + 1.2
1,241,531 - 1.5
1,241,533 + -0.2
1,241,533 + 0.1
1,241,535 - -0.3
1,241,639 - 0.4
1,241,645 + 0.5
1,241,645 - -0.3
1,241,646 - 0.2
1,241,657 - -2.0
1,241,660 + 1.1
1,241,661 - 1.2
1,241,673 - 0.0
1,241,674 + 1.9
1,241,693 - 1.0
1,241,724 + 0.8
1,241,822 - -0.2
1,241,825 - -0.0
1,241,826 + 0.5
1,241,879 + 1.0
1,241,995 - 13263 mRNA_4895 0.19 -1.9
1,242,091 - 13263 mRNA_4895 0.26 1.3
1,242,263 - 13263 mRNA_4895 0.40 0.9