Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4645

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4644: 13012 - Hypothetical Protein, at 679484 to 680110 13012 mRNA_4645: 13013 - Hypothetical Protein, at 680533 to 681409 13013 mRNA_4646: 13014 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 681473 to 684221 13014

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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679,892 - 13012 mRNA_4644 0.65 -0.3
679,921 - 13012 mRNA_4644 0.70 0.9
680,042 - 13012 mRNA_4644 0.89 1.4
680,176 - 0.8
680,199 - 0.6
680,221 - 1.2
680,225 + 0.0
680,227 - -0.9
680,233 + -0.5
680,258 - 1.8
680,349 + -0.3
680,351 - -0.4
680,363 - 0.9
680,366 + 1.0
680,368 + 0.7
680,369 - -0.2
680,376 + 0.7
680,418 + -3.1
680,544 + -0.5
680,551 + -0.3
680,571 - 1.6
680,625 + 13013 mRNA_4645 0.10 0.9
681,257 + 13013 mRNA_4645 0.83 -0.0
681,850 + 13014 mRNA_4646 0.14 0.5
681,994 - 13014 mRNA_4646 0.19 0.3
682,137 + 13014 mRNA_4646 0.24 -1.2
682,163 - 13014 mRNA_4646 0.25 2.0
682,167 + 13014 mRNA_4646 0.25 0.9
682,291 - 13014 mRNA_4646 0.30 0.2
682,398 - 13014 mRNA_4646 0.34 1.1