Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4522

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4520: 12888 - Hypothetical Protein, at 373888 to 374415 12888 mRNA_4521: 12889 - SUPERFAMILY--SSF117018, at 374666 to 375210 12889 mRNA_4522: 12890 - KOG0967 ATP-dependent DNA ligase I, at 375338 to 377134 12890 mRNA_4523: 12891 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 377162 to 379234 12891

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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374,405 - 0.3
374,409 - 0.9
374,431 + -0.1
374,536 + 0.8
374,552 + -2.7
374,563 - 1.1
374,647 + 0.8
374,943 - 12889 mRNA_4521 0.51 0.9
374,944 + 12889 mRNA_4521 0.51 -1.1
374,967 - 12889 mRNA_4521 0.55 0.5
375,137 + 12889 mRNA_4521 0.86 -0.7
375,293 + -0.5
375,840 + 12890 mRNA_4522 0.28 0.5
376,000 - 12890 mRNA_4522 0.37 1.5
376,264 + 12890 mRNA_4522 0.52 0.2
376,323 - 12890 mRNA_4522 0.55 -1.2
377,259 - 0.6
378,019 + 12891 mRNA_4523 0.41 1.2