Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4511

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4511: 12879 - Hypothetical Protein, at 351400 to 352761 12879 mRNA_4512: 12880 - KOG1152 Signal transduction serine/threonine kinase with PAS/PAC sensor domain, at 353194 to 354896 12880

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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350,449 + -0.4
350,457 + 1.5
350,479 - 1.2
350,484 + 1.8
350,586 - 1.1
350,603 + -1.8
350,650 - 0.5
350,797 + -0.2
350,800 - -1.0
350,803 + -0.4
350,817 + -2.1
350,817 + 1.1
350,921 - 0.9
350,941 - 0.0
350,947 + -0.2
350,948 - 0.1
350,969 + 1.0
351,086 - 1.0
351,088 + 0.6
351,110 - 1.6
351,128 + 0.2
351,176 + 0.1
351,226 + -0.6
351,236 + -0.3
351,284 + 2.0
351,351 + -0.3
351,447 - -1.0
351,511 - 0.2
351,526 - 0.7
351,545 + 12879 mRNA_4511 0.11 -0.7
351,603 - 12879 mRNA_4511 0.15 0.1
351,605 - 12879 mRNA_4511 0.15 0.3
351,627 + 12879 mRNA_4511 0.17 1.7
351,657 - 12879 mRNA_4511 0.19 1.2
351,665 + 12879 mRNA_4511 0.19 -0.5
351,670 - 12879 mRNA_4511 0.20 0.6
351,676 - 12879 mRNA_4511 0.20 0.0
351,688 - 12879 mRNA_4511 0.21 -0.4
351,693 - 12879 mRNA_4511 0.22 0.9
351,709 + 12879 mRNA_4511 0.23 0.4
351,727 - 12879 mRNA_4511 0.24 2.6
351,791 - 12879 mRNA_4511 0.29 0.4
351,805 + 12879 mRNA_4511 0.30 1.4
351,814 + 12879 mRNA_4511 0.30 -0.0
351,816 - 12879 mRNA_4511 0.31 1.2
351,823 - 12879 mRNA_4511 0.31 0.5
351,849 - 12879 mRNA_4511 0.33 0.5
351,879 - 12879 mRNA_4511 0.35 -0.7
351,945 + 12879 mRNA_4511 0.40 1.3
351,962 - 12879 mRNA_4511 0.41 0.1
352,038 - 12879 mRNA_4511 0.47 -2.2
352,042 - 12879 mRNA_4511 0.47 -0.1
352,051 - 12879 mRNA_4511 0.48 -0.9
352,056 + 12879 mRNA_4511 0.48 0.1
352,056 + 12879 mRNA_4511 0.48 1.4
352,059 + 12879 mRNA_4511 0.48 0.0
352,073 + 12879 mRNA_4511 0.49 -1.2
352,093 + 12879 mRNA_4511 0.51 -0.9
352,113 - 12879 mRNA_4511 0.52 -0.6
352,131 - 12879 mRNA_4511 0.54 1.2
352,196 + 12879 mRNA_4511 0.58 -1.0
352,207 + 12879 mRNA_4511 0.59 -2.9
352,208 - 12879 mRNA_4511 0.59 0.1
352,211 + 12879 mRNA_4511 0.60 0.3
352,220 - 12879 mRNA_4511 0.60 -1.3
352,220 + 12879 mRNA_4511 0.60 0.2
352,221 - 12879 mRNA_4511 0.60 0.5
352,224 - 12879 mRNA_4511 0.60 0.3
352,225 + 12879 mRNA_4511 0.61 0.6
352,227 + 12879 mRNA_4511 0.61 -0.9
352,246 + 12879 mRNA_4511 0.62 -0.4
352,259 + 12879 mRNA_4511 0.63 0.5
352,269 - 12879 mRNA_4511 0.64 0.0
352,275 - 12879 mRNA_4511 0.64 0.9
352,276 + 12879 mRNA_4511 0.64 0.5
352,286 - 12879 mRNA_4511 0.65 -0.2
352,288 - 12879 mRNA_4511 0.65 -1.4
352,304 - 12879 mRNA_4511 0.66 0.1
352,304 - 12879 mRNA_4511 0.66 -0.3
352,304 + 12879 mRNA_4511 0.66 -0.8
352,305 + 12879 mRNA_4511 0.66 0.3
352,315 + 12879 mRNA_4511 0.67 -0.2
352,318 + 12879 mRNA_4511 0.67 -0.8
352,324 - 12879 mRNA_4511 0.68 -0.0
352,420 + 12879 mRNA_4511 0.75 -0.5
352,424 - 12879 mRNA_4511 0.75 -1.5
352,437 + 12879 mRNA_4511 0.76 0.6
352,457 + 12879 mRNA_4511 0.78 -0.5
352,470 - 12879 mRNA_4511 0.79 -1.1
352,479 - 12879 mRNA_4511 0.79 -1.2
352,617 + 12879 mRNA_4511 0.89 0.2
352,623 - 12879 mRNA_4511 0.90 1.6
352,625 - -2.4
352,625 - 1.2
352,665 - -0.8
352,816 - -0.8
353,252 - 1.2
353,386 + 12880 mRNA_4512 0.11 1.3
353,675 + 12880 mRNA_4512 0.28 0.3