Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4427

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4426: 12794 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 156367 to 159071 12794 mRNA_4427: 12795 - K11539 CBR4 carbonyl reductase 4, at 160068 to 161346 12795 mRNA_4428: 12796 - Hypothetical Protein, at 161727 to 164031 12796

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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159,074 - 2.5
159,146 - 1.2
159,230 + -0.2
159,596 + 1.2
159,873 + 1.8
159,873 - -0.2
160,010 + -0.7
160,013 - 0.5
160,025 + -0.5
160,104 - -0.4
160,155 + 0.6
160,295 - 12795 mRNA_4427 0.18 1.9
160,442 + 12795 mRNA_4427 0.29 0.0
160,858 - 12795 mRNA_4427 0.62 1.5
160,875 - 12795 mRNA_4427 0.63 -0.7
161,025 + 12795 mRNA_4427 0.75 0.4
161,139 - 12795 mRNA_4427 0.84 0.9
161,146 + 12795 mRNA_4427 0.84 -0.9
161,177 - 12795 mRNA_4427 0.87 -2.4
161,348 - -2.2
161,395 - 0.7
161,396 + 1.6
161,753 - 1.1