Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4416

Experiments: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4415: 12783 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 131419 to 134157 12783 mRNA_4416: 12784 - K00002 AKR1A1, adh alcohol dehydrogenase (NADP+), at 134508 to 136011 12784 mRNA_4417: 12785 - Hypothetical Protein, at 136437 to 137903 12785

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
133,511 + 12783 mRNA_4415 0.76 1.9
133,552 + 12783 mRNA_4415 0.78 1.7
133,620 - 12783 mRNA_4415 0.80 -0.9
133,671 + 12783 mRNA_4415 0.82 -0.9
133,700 + 12783 mRNA_4415 0.83 0.4
133,701 + 12783 mRNA_4415 0.83 0.1
133,707 - 12783 mRNA_4415 0.84 0.1
134,039 + -1.0
134,560 + 0.7
134,596 + -0.8
134,625 - 0.9
134,728 + 12784 mRNA_4416 0.15 1.0
134,875 + 12784 mRNA_4416 0.24 -0.3
135,073 - 12784 mRNA_4416 0.38 -0.4
135,143 + 12784 mRNA_4416 0.42 0.1
135,149 + 12784 mRNA_4416 0.43 0.9
135,213 + 12784 mRNA_4416 0.47 0.4
135,255 - 12784 mRNA_4416 0.50 -2.0
135,336 - 12784 mRNA_4416 0.55 -0.8
135,341 - 12784 mRNA_4416 0.55 0.8
135,351 - 12784 mRNA_4416 0.56 0.1
135,419 - 12784 mRNA_4416 0.61 0.5
135,427 + 12784 mRNA_4416 0.61 0.2
135,456 + 12784 mRNA_4416 0.63 -0.7
135,457 - 12784 mRNA_4416 0.63 -0.5
135,465 + 12784 mRNA_4416 0.64 0.6
135,488 - 12784 mRNA_4416 0.65 1.4
135,499 - 12784 mRNA_4416 0.66 -1.6
135,587 + 12784 mRNA_4416 0.72 0.5
135,603 - 12784 mRNA_4416 0.73 0.4
135,669 + 12784 mRNA_4416 0.77 0.0
135,776 - 12784 mRNA_4416 0.84 -1.0
135,847 - 12784 mRNA_4416 0.89 0.1
135,903 + 0.3
135,966 + 1.1
136,058 + -0.5
136,176 - 0.4
136,183 - 1.6
136,207 - 0.4
136,207 + -1.0
136,233 + 0.1
136,253 + 0.6
136,394 - 0.2
136,528 + 1.3
136,546 - 0.5
136,694 + 12785 mRNA_4417 0.18 -1.5
136,779 + 12785 mRNA_4417 0.23 0.9
136,782 - 12785 mRNA_4417 0.24 1.6
136,782 + 12785 mRNA_4417 0.24 -0.6
136,850 + 12785 mRNA_4417 0.28 0.3