Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4308

Experiments: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4307: 12675 - Hypothetical Protein, at 1861976 to 1862718 12675 mRNA_4308: 12676 - HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407, at 1863186 to 1865063 12676 mRNA_4309: 12677 - KOG0566 Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family, at 1865492 to 1868533 12677

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
1,862,195 - 12675 mRNA_4307 0.29 -0.2
1,862,199 + 12675 mRNA_4307 0.30 0.9
1,862,209 - 12675 mRNA_4307 0.31 1.1
1,862,212 + 12675 mRNA_4307 0.32 -0.1
1,862,214 + 12675 mRNA_4307 0.32 0.8
1,862,216 - 12675 mRNA_4307 0.32 -1.0
1,862,217 + 12675 mRNA_4307 0.32 1.5
1,862,218 + 12675 mRNA_4307 0.33 -0.6
1,862,218 - 12675 mRNA_4307 0.33 -0.4
1,862,219 - 12675 mRNA_4307 0.33 -0.6
1,862,224 - 12675 mRNA_4307 0.33 -1.8
1,862,226 + 12675 mRNA_4307 0.34 0.2
1,862,234 + 12675 mRNA_4307 0.35 0.4
1,862,236 - 12675 mRNA_4307 0.35 0.7
1,862,237 + 12675 mRNA_4307 0.35 0.4
1,862,240 - 12675 mRNA_4307 0.36 0.6
1,862,240 + 12675 mRNA_4307 0.36 -0.0
1,862,248 - 12675 mRNA_4307 0.37 -0.5
1,862,253 - 12675 mRNA_4307 0.37 -0.6
1,862,253 - 12675 mRNA_4307 0.37 -0.5
1,862,253 - 12675 mRNA_4307 0.37 -3.7
1,862,295 - 12675 mRNA_4307 0.43 1.1
1,862,298 + 12675 mRNA_4307 0.43 2.1
1,862,311 + 12675 mRNA_4307 0.45 0.3
1,862,322 - 12675 mRNA_4307 0.47 0.9
1,862,332 - 12675 mRNA_4307 0.48 0.0
1,862,332 + 12675 mRNA_4307 0.48 0.8
1,862,334 - 12675 mRNA_4307 0.48 -1.0
1,862,337 + 12675 mRNA_4307 0.49 0.4
1,862,338 + 12675 mRNA_4307 0.49 -0.8
1,862,340 - 12675 mRNA_4307 0.49 -1.6
1,862,341 - 12675 mRNA_4307 0.49 0.5
1,862,343 + 12675 mRNA_4307 0.49 1.4
1,862,343 + 12675 mRNA_4307 0.49 0.4
1,862,346 + 12675 mRNA_4307 0.50 0.5
1,862,348 + 12675 mRNA_4307 0.50 1.0
1,862,354 - 12675 mRNA_4307 0.51 0.8
1,862,354 - 12675 mRNA_4307 0.51 -1.6
1,862,357 - 12675 mRNA_4307 0.51 0.5
1,862,364 + 12675 mRNA_4307 0.52 -1.1
1,862,364 + 12675 mRNA_4307 0.52 -2.0
1,862,365 + 12675 mRNA_4307 0.52 1.0
1,862,367 - 12675 mRNA_4307 0.53 0.2
1,862,368 + 12675 mRNA_4307 0.53 0.3
1,862,369 + 12675 mRNA_4307 0.53 -1.3
1,862,370 + 12675 mRNA_4307 0.53 1.4
1,862,378 - 12675 mRNA_4307 0.54 0.0
1,862,380 + 12675 mRNA_4307 0.54 0.0
1,862,380 + 12675 mRNA_4307 0.54 1.0
1,862,386 + 12675 mRNA_4307 0.55 1.5
1,862,391 + 12675 mRNA_4307 0.56 -1.1
1,862,394 + 12675 mRNA_4307 0.56 -0.5
1,862,401 - 12675 mRNA_4307 0.57 -0.7
1,862,406 - 12675 mRNA_4307 0.58 1.0
1,862,436 - 12675 mRNA_4307 0.62 0.7
1,862,448 + 12675 mRNA_4307 0.64 -0.7
1,862,474 + 12675 mRNA_4307 0.67 0.3
1,862,523 - 12675 mRNA_4307 0.74 -0.9
1,862,524 + 12675 mRNA_4307 0.74 1.5
1,862,530 + 12675 mRNA_4307 0.75 0.6
1,862,547 + 12675 mRNA_4307 0.77 0.8
1,862,551 - 12675 mRNA_4307 0.77 0.6
1,862,592 + 12675 mRNA_4307 0.83 2.7
1,862,595 - 12675 mRNA_4307 0.83 2.6
1,862,603 - 12675 mRNA_4307 0.84 2.0
1,862,604 - 12675 mRNA_4307 0.85 0.4
1,862,606 + 12675 mRNA_4307 0.85 -0.8
1,862,649 + -0.5
1,862,680 + -0.0
1,862,702 + -0.2
1,862,710 + 1.0
1,862,713 + 0.1
1,862,719 + 0.1
1,862,721 - 1.7
1,862,744 - 0.8
1,862,749 - 0.1
1,862,762 + 2.6
1,862,763 + 0.4
1,862,772 - -0.9
1,862,866 - 0.7
1,862,873 - 0.3
1,862,888 + -0.5
1,862,891 + -0.0
1,862,916 + -0.5
1,862,924 - 1.1
1,862,928 + 0.3
1,862,931 - 0.2
1,862,934 - 0.7
1,862,950 - 0.2
1,862,966 - 0.3
1,863,088 - 0.0
1,863,186 - 0.5
1,863,631 - 12676 mRNA_4308 0.24 2.4
1,863,634 + 12676 mRNA_4308 0.24 -1.6
1,863,647 - 12676 mRNA_4308 0.25 -2.3
1,864,072 + 12676 mRNA_4308 0.47 0.6
1,864,088 + 12676 mRNA_4308 0.48 2.1
1,864,236 + 12676 mRNA_4308 0.56 0.6
1,864,368 - 12676 mRNA_4308 0.63 -1.0
1,864,946 + 0.0
1,864,963 + 0.3
1,865,082 + -0.5
1,865,088 - 0.7
1,865,092 - -0.3
1,865,093 - 1.3
1,865,096 - 2.5
1,865,109 + 0.5
1,865,109 - 1.4
1,865,110 + 0.6
1,865,111 + -0.5
1,865,130 - 1.0
1,865,150 + -1.2
1,865,150 - 0.2
1,865,151 + 0.3
1,865,158 - 1.2
1,865,160 + 0.5
1,865,193 + -0.2
1,865,195 - -0.1
1,865,201 + 0.7
1,865,201 + 1.0
1,865,205 + 0.5
1,865,221 + 1.8
1,865,230 - 0.4
1,865,231 + 0.5
1,865,335 - 1.1
1,865,340 - 0.2
1,865,363 - -0.0
1,865,364 + 0.3
1,865,509 - -0.1