Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4289

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4288: 12656 - Hypothetical Protein, at 1811601 to 1812350 12656 mRNA_4289: 12657 - K15445 TRMT10A, TRM10, RG9MTD2 tRNA (guanine9-N1)-methyltransferase, at 1812694 to 1814089 12657 mRNA_4290: 12658 - Hypothetical Protein, at 1814315 to 1814636 12658

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,811,975 - 12656 mRNA_4288 0.50 2.3
1,812,022 + 12656 mRNA_4288 0.56 0.1
1,812,096 + 12656 mRNA_4288 0.66 0.3
1,812,267 - 12656 mRNA_4288 0.89 0.2
1,812,425 + 0.3
1,812,544 - 0.9
1,812,545 - 1.4
1,812,548 + 1.3
1,812,570 + -0.3
1,812,578 + 0.2
1,812,613 - -2.9
1,812,614 + -0.0
1,812,616 - -1.2
1,812,616 - -1.2
1,812,704 - -0.0
1,813,132 - 12657 mRNA_4289 0.31 -2.0
1,813,164 + 12657 mRNA_4289 0.34 -0.4
1,813,591 + 12657 mRNA_4289 0.64 -1.6
1,813,716 - 12657 mRNA_4289 0.73 0.2
1,813,734 - 12657 mRNA_4289 0.74 -2.3
1,813,895 + 12657 mRNA_4289 0.86 0.1
1,813,908 + 12657 mRNA_4289 0.87 0.6
1,814,200 - 0.5
1,814,266 - 2.6
1,814,347 - 0.3
1,814,457 + 12658 mRNA_4290 0.44 0.3
1,814,726 - -0.1
1,814,741 + -0.7
1,814,850 - 0.9
1,814,887 + -0.4
1,814,917 + 1.6
1,815,019 + 0.2