Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4283

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4282: 12650 - Hypothetical Protein, at 1796863 to 1797558 12650 mRNA_4283: 12651 - KOG2383 Predicted ATPase, at 1797865 to 1800888 12651 mRNA_4284: 12652 - KOG2806 Chitinase, at 1801203 to 1803513 12652

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,796,879 + 0.3
1,797,060 + 12650 mRNA_4282 0.28 -0.3
1,797,216 + 12650 mRNA_4282 0.51 -0.5
1,797,336 + 12650 mRNA_4282 0.68 0.9
1,797,413 - 12650 mRNA_4282 0.79 0.9
1,797,761 - 1.2
1,797,781 - 3.1
1,797,785 + 0.7
1,797,795 - 0.3
1,797,801 - -0.3
1,797,802 + -0.3
1,797,946 - 0.4
1,797,948 - 1.6
1,797,950 - 1.8
1,798,811 + 12651 mRNA_4283 0.31 1.6
1,798,965 + 12651 mRNA_4283 0.36 0.2
1,799,204 - 12651 mRNA_4283 0.44 0.2
1,799,675 + 12651 mRNA_4283 0.60 -0.6
1,800,116 - 12651 mRNA_4283 0.74 -0.4
1,800,179 + 12651 mRNA_4283 0.77 0.2
1,800,377 + 12651 mRNA_4283 0.83 0.9
1,800,527 + 12651 mRNA_4283 0.88 0.4
1,800,565 + 12651 mRNA_4283 0.89 0.4
1,800,583 - 12651 mRNA_4283 0.90 1.6
1,800,843 - 0.8
1,800,852 + 0.7
1,800,864 + -1.1
1,800,878 + -0.5
1,801,028 - -0.8
1,801,034 + 1.6
1,801,294 + 0.2
1,801,406 - 1.5
1,801,518 + 12652 mRNA_4284 0.14 1.2