Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4156

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4155: 12523 - K12492 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1, at 1484305 to 1486151 12523 mRNA_4156: 12524 - KOG1242 Protein containing adaptin N-terminal region, at 1486313 to 1494426 12524 mRNA_4157: 12525 - KOG2823 Cellular protein (glioma tumor suppressor candidate region gene 2), at 1494663 to 1496087 12525

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,485,518 - 12523 mRNA_4155 0.66 0.8
1,485,735 + 12523 mRNA_4155 0.77 1.1
1,486,134 + 0.0
1,486,184 + -0.9
1,486,313 - -0.5
1,486,321 - 0.4
1,486,878 - -1.2
1,487,999 - 12524 mRNA_4156 0.21 -0.9
1,489,368 + 12524 mRNA_4156 0.38 -1.2
1,489,495 + 12524 mRNA_4156 0.39 -0.6
1,494,399 - 0.2
1,494,437 - 0.1
1,494,467 - 0.2
1,494,559 + 2.1
1,494,580 - 0.6
1,494,605 - -0.2
1,494,610 + 2.5