Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4042

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4041: 12409 - HMMPfam-Sds3-like-PF08598, at 1221368 to 1222599 12409 mRNA_4042: 12410 - KOG0807 Carbon-nitrogen hydrolase, at 1222725 to 1223895 12410 mRNA_4043: 12411 - Hypothetical Protein, at 1224435 to 1225613 12411

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,222,533 - 0.5
1,222,545 + 2.3
1,222,969 - 12410 mRNA_4042 0.21 -1.4
1,223,223 - 12410 mRNA_4042 0.43 0.1
1,223,414 + 12410 mRNA_4042 0.59 0.1
1,223,741 + 12410 mRNA_4042 0.87 -0.1
1,223,838 + 2.2
1,223,846 - -0.4
1,223,863 - 0.3
1,223,864 - 0.3
1,223,999 - 0.3
1,224,005 + 1.3
1,224,023 + 0.1
1,224,129 + 1.2
1,224,442 - 0.6
1,224,446 + 1.1
1,224,479 + 0.6
1,224,581 - 12411 mRNA_4043 0.12 -0.3
1,224,605 - 12411 mRNA_4043 0.14 -0.1