Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4023

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4022: 12390 - KOG2661 Peptidase family M48, at 1180594 to 1181890 12390 mRNA_4023: 12391 - K01061 E3.1.1.45 carboxymethylenebutenolidase, at 1182056 to 1183388 12391 mRNA_4024: 12392 - HMMPfam-Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1)-PF10453,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,SMART-zinc finger-SM00356, at 1183513 to 1185147 12392

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1,181,590 + 12390 mRNA_4022 0.77 2.8
1,181,677 - 12390 mRNA_4022 0.84 -0.5
1,181,957 + 0.1
1,181,960 + -0.2
1,182,117 - -0.4
1,182,253 + 12391 mRNA_4023 0.15 0.4
1,182,253 + 12391 mRNA_4023 0.15 -0.9
1,182,848 + 12391 mRNA_4023 0.59 -1.2
1,183,125 - 12391 mRNA_4023 0.80 -2.0
1,183,126 + 12391 mRNA_4023 0.80 -0.1
1,183,152 + 12391 mRNA_4023 0.82 -0.7
1,183,303 - 0.2
1,183,312 - 0.6