Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3957

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3956: 12324 - KOG1843 Uncharacterized conserved protein, at 991807 to 993961 12324 mRNA_3957: 12325 - KOG0254 Predicted transporter (major facilitator superfamily), at 994846 to 997069 12325 mRNA_3958: 12326 - Hypothetical Protein, at 997210 to 999982 12326

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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993,996 + 1.0
994,013 + 0.2
994,014 - 0.1
994,019 - 1.0
994,029 + 0.2
994,165 - -0.7
994,166 + 1.6
994,179 + -1.1
994,315 + 0.9
994,318 - -0.6
994,344 + -0.9
994,472 - 0.6
994,500 - 0.3
994,556 - 0.7
994,581 + -0.1
994,597 - 0.5
994,597 + -0.0
994,599 - -1.9
994,604 - 1.1
994,613 - 0.2
994,615 + 0.0
994,624 + -0.7
994,644 - 0.3
994,644 - 0.3
994,645 - 1.0
994,645 + 1.3
994,651 - 1.0
994,660 + -0.3
994,679 + 0.3
994,682 + -0.4
994,686 + -0.7
994,702 - -0.3
994,720 - 0.8
994,720 + 1.1
994,723 + -1.4
994,732 - 2.1
994,735 - 1.2
994,736 - -2.1
994,739 - 0.3
994,741 - -0.3
994,746 + 2.2
994,750 + 0.1
994,757 - 0.4
994,759 + -0.1
994,765 - -1.0
994,796 + 0.2
994,799 + 0.5
994,800 - -0.3
994,870 - 1.5
994,913 - 0.4
994,916 + 1.5
994,917 - 0.1
994,924 - -0.4
994,949 - -0.6
994,957 + 1.0
994,981 - -0.1
995,041 + 1.2
995,046 + 1.0
995,183 - 12325 mRNA_3957 0.15 -0.7
995,201 - 12325 mRNA_3957 0.16 -0.8
996,212 - 12325 mRNA_3957 0.61 1.1
996,523 + 12325 mRNA_3957 0.75 0.2
997,073 + -0.7
997,311 - 0.3
997,381 + 0.5
997,566 - 12326 mRNA_3958 0.13 -0.3
997,701 + 12326 mRNA_3958 0.18 0.4
997,710 + 12326 mRNA_3958 0.18 -0.5
997,845 - 12326 mRNA_3958 0.23 0.8