Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3854

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3853: 12221 - K08193 SLC17A MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other, at 746204 to 748742 12221 mRNA_3854: 12222 - Hypothetical Protein, at 749490 to 750342 12222 mRNA_3855: 12223 - SUPERFAMILY--SSF52047, at 750615 to 752769 12223

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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748,648 - -2.8
748,650 + 0.1
748,657 + -0.4
748,782 - -0.0
748,800 + 1.7
748,810 - -0.2
748,814 - 0.8
748,831 + 0.0
748,912 + -1.6
748,914 + 0.0
748,915 - 1.4
748,931 + 0.3
748,935 + -0.4
748,936 - -1.1
748,937 + -0.1
748,939 - 0.9
748,948 + 2.0
748,953 - 0.1
748,976 - -0.6
748,982 + 1.5
748,991 + -0.1
748,998 - -1.5
749,044 + 1.9
749,048 - 0.1
749,057 - -0.2
749,058 - 0.6
749,063 - 0.1
749,068 + 1.2
749,071 + 0.3
749,072 + 0.0
749,089 - -0.9
749,096 + 0.4
749,098 - 0.3
749,225 + -0.3
749,227 - 0.9
749,243 - -0.6
749,251 - 1.0
749,258 - 1.2
749,259 + 0.2
749,263 + -2.0
749,266 + 0.8
749,268 - -1.1
749,283 + -0.1
749,364 - 0.6
749,373 - -0.4
749,374 + -0.9
749,379 + -0.7
749,388 - -0.8
749,392 + -0.0
749,393 - 0.6
749,395 + 0.6
749,402 + 0.5
749,402 + 0.8
749,409 + 0.7
749,416 - 0.3
749,422 + -1.4
749,423 + 0.2
749,425 - 0.8
749,425 + -0.2
749,538 + -0.8
749,583 - 12222 mRNA_3854 0.11 -0.9
749,588 - 12222 mRNA_3854 0.11 -0.8
749,661 - 12222 mRNA_3854 0.20 -0.7
749,852 - 12222 mRNA_3854 0.42 0.3
749,999 - 12222 mRNA_3854 0.60 -0.4
750,004 + 12222 mRNA_3854 0.60 1.7
750,021 - 12222 mRNA_3854 0.62 -1.0
750,046 + 12222 mRNA_3854 0.65 1.7
750,391 + -0.5
751,165 + 12223 mRNA_3855 0.26 1.7
751,196 + 12223 mRNA_3855 0.27 -1.0