Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3759

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3758: 12126 - HMMPfam-Glycosyl hydrolases family 15-PF00723,SUPERFAMILY--SSF48208, at 515718 to 518534 12126 mRNA_3759: 12127 - Hypothetical Protein, at 518621 to 520492 12127 mRNA_3760: 12128 - K10746 EXO1 exonuclease 1, at 521061 to 522364 12128

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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517,679 + 12126 mRNA_3758 0.70 0.6
517,864 - 12126 mRNA_3758 0.76 0.2
517,868 - 12126 mRNA_3758 0.76 0.5
517,879 + 12126 mRNA_3758 0.77 0.2
517,981 + 12126 mRNA_3758 0.80 0.0
517,987 - 12126 mRNA_3758 0.81 1.0
518,191 + 12126 mRNA_3758 0.88 1.6
518,314 - 0.6
518,461 - -0.3
518,463 - 0.6
518,468 + 0.9
518,591 + -0.7
518,614 - -0.7
518,618 + -0.3
518,622 + -0.6
518,632 - -0.2
518,632 - 1.6
518,653 - -1.1
518,772 + 0.4
518,790 + 0.1
518,818 - 12127 mRNA_3759 0.11 0.4
518,819 + 12127 mRNA_3759 0.11 2.2
518,821 - 12127 mRNA_3759 0.11 0.3
518,826 + 12127 mRNA_3759 0.11 -0.0
518,826 + 12127 mRNA_3759 0.11 2.2
519,024 - 12127 mRNA_3759 0.22 0.8
519,084 + 12127 mRNA_3759 0.25 0.8
519,085 + 12127 mRNA_3759 0.25 -0.4
519,192 + 12127 mRNA_3759 0.31 -2.4
519,247 + 12127 mRNA_3759 0.33 0.6
519,644 + 12127 mRNA_3759 0.55 1.4
519,790 + 12127 mRNA_3759 0.62 -1.2
520,093 - 12127 mRNA_3759 0.79 2.3
520,100 - 12127 mRNA_3759 0.79 -0.6
520,233 - 12127 mRNA_3759 0.86 -1.2
520,243 + 12127 mRNA_3759 0.87 -2.5
520,433 - -1.1
520,713 - 0.6
520,965 - 0.3
521,233 + 12128 mRNA_3760 0.13 0.3