Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3643

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3642: 12010 - K08818 CDC2L cell division cycle 2-like, at 232262 to 233977 12010 mRNA_3643: 12011 - HMMPfam-Protein of unknown function (DUF1765)-PF08578, at 234465 to 241327 12011

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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233,988 - 0.6
233,998 + -0.1
234,004 + 1.3
234,155 + 0.2
234,279 + -1.9
234,535 - 0.7
235,189 - 12011 mRNA_3643 0.11 0.4
235,314 + 12011 mRNA_3643 0.12 0.5
235,324 + 12011 mRNA_3643 0.13 0.2
235,331 - 12011 mRNA_3643 0.13 0.5
235,441 + 12011 mRNA_3643 0.14 1.2
235,612 - 12011 mRNA_3643 0.17 1.3
235,779 - 12011 mRNA_3643 0.19 0.8
235,796 + 12011 mRNA_3643 0.19 1.6
236,142 + 12011 mRNA_3643 0.24 0.1
236,458 - 12011 mRNA_3643 0.29 -0.2
236,663 - 12011 mRNA_3643 0.32 0.2
237,164 + 12011 mRNA_3643 0.39 0.1
237,327 - 12011 mRNA_3643 0.42 1.3
237,582 + 12011 mRNA_3643 0.45 0.2
237,609 + 12011 mRNA_3643 0.46 1.0
237,648 - 12011 mRNA_3643 0.46 -0.2
237,739 + 12011 mRNA_3643 0.48 -0.0
237,900 + 12011 mRNA_3643 0.50 -1.7
238,011 + 12011 mRNA_3643 0.52 -0.5
238,188 - 12011 mRNA_3643 0.54 -0.4
238,343 + 12011 mRNA_3643 0.57 -1.2
238,407 - 12011 mRNA_3643 0.57 0.2
238,415 + 12011 mRNA_3643 0.58 0.2
238,509 - 12011 mRNA_3643 0.59 -1.0
238,528 - 12011 mRNA_3643 0.59 0.1
238,528 - 12011 mRNA_3643 0.59 -0.2
238,532 - 12011 mRNA_3643 0.59 -0.1
238,538 - 12011 mRNA_3643 0.59 -0.6
238,609 - 12011 mRNA_3643 0.60 0.0
238,753 + 12011 mRNA_3643 0.62 -1.4
238,893 + 12011 mRNA_3643 0.65 -0.1
239,598 + 12011 mRNA_3643 0.75 1.8
239,797 - 12011 mRNA_3643 0.78 -0.4
239,798 + 12011 mRNA_3643 0.78 -0.6
239,873 + 12011 mRNA_3643 0.79 -0.4
240,215 - 12011 mRNA_3643 0.84 -1.0
240,235 + 12011 mRNA_3643 0.84 0.3
240,473 - 12011 mRNA_3643 0.88 1.4
240,512 - 12011 mRNA_3643 0.88 1.2
240,553 + 12011 mRNA_3643 0.89 -1.1
240,790 - 0.7
240,791 - -1.0
240,960 + 0.1
240,997 + 0.7
241,241 - 1.1
241,302 - 2.8
241,519 - 0.5
241,536 - -0.1
241,559 + -0.7
241,820 - -0.5
241,822 + -0.8
241,836 + -0.4
241,965 + -0.2
241,967 + 1.4
241,991 + 0.6
241,995 + -0.1
242,098 - -1.3
242,115 - 2.2
242,122 + -0.2
242,123 - 0.1
242,132 - 0.1
242,143 + -0.9
242,144 + -0.5
242,146 - 0.2
242,259 + 0.9
242,302 + 1.2
242,306 + -0.2