Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3608

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3607: 11975 - BLAST putative transmembrane protein [Rhizoctonia solani 123E], at 159428 to 160353 11975 mRNA_3608: 11976 - Hypothetical Protein, at 161019 to 162088 11976 mRNA_3609: 11977 - K00235 SDHB, SDH2 succinate dehydrogenase (ubiquinone) iron-sulfur subunit, at 162464 to 163802 11977

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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160,202 + 11975 mRNA_3607 0.84 0.6
160,222 + 11975 mRNA_3607 0.86 -1.5
160,470 - -0.7
160,508 + -2.0
160,515 - -0.0
160,686 + 0.3
160,813 - 1.1
161,184 - 11976 mRNA_3608 0.15 -0.3
161,232 + 11976 mRNA_3608 0.20 1.5
161,473 + 11976 mRNA_3608 0.42 0.1
161,523 - 11976 mRNA_3608 0.47 0.3
161,538 - 11976 mRNA_3608 0.49 1.3
161,709 + 11976 mRNA_3608 0.64 -0.8
161,826 + 11976 mRNA_3608 0.75 0.8
162,091 - 0.1
162,421 - -0.1