Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3537

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3537: 11905 - Hypothetical Protein, at 102 to 917 11905

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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2 + 0.1
2 + 2.0
2 + -0.5
2 + -0.1
2 + 0.6
2 + 0.4
2 + -0.1
14 + 0.7
26 + -0.7
36 + 0.5
39 + 0.7
42 - 0.4
50 + 1.1
50 + -1.5
50 + 0.6
53 - -1.4
57 + 2.3
59 - 1.8
103 + 0.5
104 + -0.7
112 + 0.8
117 - 0.0
120 - -3.8
140 - 0.2
141 + -1.3
146 + 0.8
150 + 0.9
199 - 11905 mRNA_3537 0.12 0.9
200 + 11905 mRNA_3537 0.12 -0.3
200 - 11905 mRNA_3537 0.12 1.7
200 - 11905 mRNA_3537 0.12 -1.8
200 - 11905 mRNA_3537 0.12 0.4
201 - 11905 mRNA_3537 0.12 -0.5
207 + 11905 mRNA_3537 0.13 0.6
207 + 11905 mRNA_3537 0.13 0.0
207 + 11905 mRNA_3537 0.13 1.1
209 + 11905 mRNA_3537 0.13 0.5
210 + 11905 mRNA_3537 0.13 -0.4
213 + 11905 mRNA_3537 0.14 0.9
213 + 11905 mRNA_3537 0.14 0.8
214 + 11905 mRNA_3537 0.14 0.5
214 + 11905 mRNA_3537 0.14 -0.2
218 + 11905 mRNA_3537 0.14 2.7
221 + 11905 mRNA_3537 0.15 -0.6
222 + 11905 mRNA_3537 0.15 -0.4
222 + 11905 mRNA_3537 0.15 0.7
222 + 11905 mRNA_3537 0.15 -0.1
223 - 11905 mRNA_3537 0.15 -1.0
225 - 11905 mRNA_3537 0.15 -1.6
227 - 11905 mRNA_3537 0.15 -0.4
227 + 11905 mRNA_3537 0.15 0.7
230 + 11905 mRNA_3537 0.16 2.8
230 + 11905 mRNA_3537 0.16 0.6
246 - 11905 mRNA_3537 0.18 0.3
246 - 11905 mRNA_3537 0.18 -1.3
251 + 11905 mRNA_3537 0.18 0.2
252 + 11905 mRNA_3537 0.18 1.4
260 + 11905 mRNA_3537 0.19 -0.7
262 + 11905 mRNA_3537 0.20 -0.8
265 - 11905 mRNA_3537 0.20 1.4
272 - 11905 mRNA_3537 0.21 0.2
274 + 11905 mRNA_3537 0.21 -0.1
325 - 11905 mRNA_3537 0.27 1.1
326 - 11905 mRNA_3537 0.27 -0.1
341 + 11905 mRNA_3537 0.29 -0.4
359 + 11905 mRNA_3537 0.31 0.4
362 + 11905 mRNA_3537 0.32 -0.9
367 - 11905 mRNA_3537 0.32 0.5
368 + 11905 mRNA_3537 0.33 -0.4
368 + 11905 mRNA_3537 0.33 -1.0
368 + 11905 mRNA_3537 0.33 -1.3
373 + 11905 mRNA_3537 0.33 0.3
373 - 11905 mRNA_3537 0.33 -0.6
373 - 11905 mRNA_3537 0.33 0.4
379 + 11905 mRNA_3537 0.34 -0.2
380 + 11905 mRNA_3537 0.34 0.7
417 + 11905 mRNA_3537 0.39 1.3
452 + 11905 mRNA_3537 0.43 0.4
472 + 11905 mRNA_3537 0.45 -0.5
484 + 11905 mRNA_3537 0.47 -1.7
489 - 11905 mRNA_3537 0.47 -0.6
503 - 11905 mRNA_3537 0.49 -0.9
511 + 11905 mRNA_3537 0.50 2.7
518 + 11905 mRNA_3537 0.51 0.3
523 + 11905 mRNA_3537 0.52 1.6
533 + 11905 mRNA_3537 0.53 0.4
539 + 11905 mRNA_3537 0.54 0.3
550 + 11905 mRNA_3537 0.55 0.4
579 + 11905 mRNA_3537 0.58 1.0
638 - 11905 mRNA_3537 0.66 -0.9
640 - 11905 mRNA_3537 0.66 0.5
657 + 11905 mRNA_3537 0.68 0.6
762 - 11905 mRNA_3537 0.81 -2.2
768 + 11905 mRNA_3537 0.82 -1.2
791 - 11905 mRNA_3537 0.84 -0.5
801 + 11905 mRNA_3537 0.86 1.3
804 + 11905 mRNA_3537 0.86 1.3
822 + 11905 mRNA_3537 0.88 1.6
827 + 11905 mRNA_3537 0.89 0.3
842 + 0.4
842 + 2.2
845 - 1.2
962 - 1.2
990 + 1.3
1,074 + -2.4
1,080 - -0.3
1,107 + -0.6
1,110 - -0.5
1,123 + 1.5
1,143 + 0.0
1,256 - 0.5
1,278 + -1.9
1,336 + 0.5
1,371 - 0.0
1,404 - -0.0
1,429 + 0.3
1,450 + 1.1
1,528 + -0.4
1,550 + 0.1
1,647 - 0.1
1,653 + 1.2
1,661 - 2.4
1,663 + -0.1
1,719 + -0.2
1,720 + 0.7
1,760 + 0.8
1,814 - 0.9
1,902 - 0.7