Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3533

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3532: 11900 - K00670 NAA30, MAK3 N-alpha-acetyltransferase 30, at 325882 to 326936 11900 mRNA_3533: 11901 - K08337 ATG7 ubiquitin-like modifier-activating enzyme ATG7, at 327096 to 329991 11901 mRNA_3534: 11902 - Hypothetical Protein, at 330976 to 331488 11902

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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326,136 - 11900 mRNA_3532 0.24 0.2
326,152 - 11900 mRNA_3532 0.26 1.5
326,158 + 11900 mRNA_3532 0.26 1.1
326,167 - 11900 mRNA_3532 0.27 0.8
326,179 + 11900 mRNA_3532 0.28 1.2
326,192 - 11900 mRNA_3532 0.29 0.7
326,202 - 11900 mRNA_3532 0.30 0.9
326,249 - 11900 mRNA_3532 0.35 0.8
326,266 - 11900 mRNA_3532 0.36 3.6
326,266 + 11900 mRNA_3532 0.36 1.0
326,274 - 11900 mRNA_3532 0.37 -0.2
326,290 + 11900 mRNA_3532 0.39 1.0
326,312 - 11900 mRNA_3532 0.41 0.7
326,326 + 11900 mRNA_3532 0.42 0.8
326,326 + 11900 mRNA_3532 0.42 0.9
326,326 - 11900 mRNA_3532 0.42 0.5
326,343 - 11900 mRNA_3532 0.44 -0.6
326,347 + 11900 mRNA_3532 0.44 0.3
326,364 - 11900 mRNA_3532 0.46 2.5
326,365 - 11900 mRNA_3532 0.46 0.0
326,390 - 11900 mRNA_3532 0.48 -0.1
326,391 + 11900 mRNA_3532 0.48 1.3
326,419 - 11900 mRNA_3532 0.51 0.3
326,426 - 11900 mRNA_3532 0.52 0.7
326,531 - 11900 mRNA_3532 0.62 -0.7
326,545 + 11900 mRNA_3532 0.63 2.5
326,554 + 11900 mRNA_3532 0.64 -0.6
326,640 + 11900 mRNA_3532 0.72 3.1
326,682 - 11900 mRNA_3532 0.76 0.0
326,835 - 0.2
326,842 + -0.4
326,973 + 1.0
327,163 + -2.4
327,533 - 11901 mRNA_3533 0.15 0.7
327,606 - 11901 mRNA_3533 0.18 0.3
327,901 - 11901 mRNA_3533 0.28 -1.8
328,024 + 11901 mRNA_3533 0.32 0.9
328,216 + 11901 mRNA_3533 0.39 2.6
328,567 - 11901 mRNA_3533 0.51 -0.6
328,932 + 11901 mRNA_3533 0.63 -0.2
329,027 - 11901 mRNA_3533 0.67 -0.3
329,199 + 11901 mRNA_3533 0.73 0.8
329,199 + 11901 mRNA_3533 0.73 -0.2
329,220 + 11901 mRNA_3533 0.73 -0.1
329,236 + 11901 mRNA_3533 0.74 0.4
329,668 - 11901 mRNA_3533 0.89 -0.1
329,724 + 0.7
329,763 + -0.7
329,931 + 0.5
330,208 + -0.5
330,213 + 0.2
330,232 + -0.5
330,242 - -0.1
330,343 + -0.3
330,361 - -1.3
330,485 - 0.6
330,509 + 0.8
330,653 + 0.1